RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SLC5A4Q9NY91 659 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 PSD3Q9NYI0 1048 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 DENND3A2RUS2 1198 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 TUBBP07437 444 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 SMTNP53814 917 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 NCKAP1LP55160 1127 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 IGBP1P78318 339 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 KRT83P78385 493 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 LAMC2Q13753 1193 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 CASP8Q14790 479 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 LRRC71Q8N4P6 559 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 TMEM161BQ8NDZ6 487 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 ZSWIM2Q8NEG5 633 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 MCPH1Q8NEM0 835 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 KIFAP3Q92845 792 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 CEP89Q96ST8 783 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 NUP58Q9BVL2 599 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 TIPINQ9BVW5 301 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
UBA3-201ENST00000349511 DHX33Q9H6R0 707 aaKnown RBP14.62□□□□□ -0.07
UBA3-201ENST00000349511 VPS18Q9P253 973 aa14.62□□□□□ -0.07
UBA3-201ENST00000349511 N4BP1O75113 896 aaKnown RBP14.61□□□□□ -0.07
UBA3-201ENST00000349511 LGR5O75473 907 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 TARBP2Q15633 366 aaKnown RBP14.61□□□□□ -0.07
UBA3-201ENST00000349511 DCAF17Q5H9S7 520 aaPredicted RBP14.61□□□□□ -0.07
UBA3-201ENST00000349511 TCERG1LQ5VWI1 586 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 WDR93Q6P2C0 686 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 ZNF662Q6ZS27 426 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 HS2ST1Q7LGA3 356 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 KIAA1328Q86T90 577 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 ASAP3Q8TDY4 903 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 JAKMIP2Q96AA8 810 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 CAPNS2Q96L46 248 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 CBWD1Q9BRT8 395 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 CRACR2AQ9BSW2 395 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
UBA3-201ENST00000349511 RBM47A0AV96 593 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 RBAK-RBAKDNI3L0D1 243 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 SRGAP2O75044 1071 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 TRIM21P19474 475 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 CYLC1P35663 651 aaPredicted RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 GTF2BQ00403 316 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 FKBP15Q5T1M5 1219 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 PAPD7Q5XG87 772 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 ZC3H3Q8IXZ2 948 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 OR6J1Q8NGC5 347 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 ACCSQ96QU6 501 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 MMS19Q96T76 1030 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 SMARCAD1Q9H4L7 1026 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 NHEJ1Q9H9Q4 299 aaPredicted RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 TBX20Q9UMR3 447 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.6□□□□□ -0.07
UBA3-201ENST00000349511 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 RCCD1A6NED2 376 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 LRRIQ4A6NIV6 560 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 DYNC1LI2O43237 492 aaPredicted RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 LGALS2P05162 132 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 GJB1P08034 283 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 GLRA2P23416 452 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 RPL13P26373 211 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 PSMC4P43686 418 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 LMAN1P49257 510 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 CAP1Q01518 475 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 FOXR2Q6PJQ5 311 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 PLPPR4Q7Z2D5 763 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 GPIHBP1Q8IV16 184 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 TRIM59Q8IWR1 403 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 RETREG2Q8NC44 543 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 ATP8B4Q8TF62 1192 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 HHIPL1Q96JK4 782 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 IFT74Q96LB3 600 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 MMRN2Q9H8L6 949 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 ZNHIT6Q9NWK9 470 aaKnown RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 ARMCX3Q9UH62 379 aaPredicted RBP14.6□□□□□ -0.07
UBA3-201ENST00000349511 EMSYQ7Z589 1322 aa14.6□□□□□ -0.07
UBA3-201ENST00000349511 EVPLQ92817 2033 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 EIF3CLB5ME19 914 aaKnown RBP14.59□□□□□ -0.07
UBA3-201ENST00000349511 ANKRD63C9JTQ0 380 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 KRT86O43790 486 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 GNA14O95837 355 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 MAPTP10636 758 aaKnown RBP14.59□□□□□ -0.07
UBA3-201ENST00000349511 ZBED6P86452 979 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 APBA1Q02410 837 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 KCNH2Q12809 1159 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 NOGQ13253 232 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
UBA3-201ENST00000349511 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 USP6NLQ92738 828 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 EIF3CQ99613 913 aaKnown RBP14.59□□□□□ -0.07
UBA3-201ENST00000349511 LACRTQ9GZZ8 138 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 FAM207AQ9NSI2 230 aaPredicted RBP14.59□□□□□ -0.07
UBA3-201ENST00000349511 GABRQQ9UN88 632 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 GOLGA8IPA6NC78 632 aa14.59□□□□□ -0.07
UBA3-201ENST00000349511 GOLGA8JA6NMD2 632 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms