RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 LRCH1Q9Y2L9 728 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 NR2E1Q9Y466 385 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 ECE2O60344 883 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 GM2AP17900 193 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 PTGIRP43119 386 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 LRRC14Q15048 493 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 MTFR1Q15390 333 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DDB1Q16531 1140 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 RNF220Q5VTB9 566 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DCAF12L1Q5VU92 463 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DPY19L2P1Q6NXN4 242 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 FRMD5Q7Z6J6 570 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM73Q86UV7 250 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 RBM12BQ8IXT5 1001 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 MAIP1Q8WWC4 291 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 NUDCD1Q96RS6 583 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 PIGSQ96S52 555 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 BIN2Q9UBW5 565 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 SCOCQ9UIL1 159 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 NCANO14594 1321 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 SIGLEC16A6NMB1 481 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 PODXLO00592 558 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 CETN3O15182 167 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 HSPA6P17066 643 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 EPS15P42566 896 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 RANBP1P43487 201 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 ENOX2Q16206 610 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 PTPROQ16827 1216 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 SPDYAQ5MJ70 313 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 INTS8Q75QN2 995 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 VPS36Q86VN1 386 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 KCTD17Q8N5Z5 321 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 ARHGEF2Q92974 986 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 MAGEB18Q96M61 343 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 ERVK-5Q9HDB9 667 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 PCDHA2Q9Y5H9 948 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 FOCADQ5VW36 1801 aa11.09□□□□□ -0.63
CHRNA1-202ENST00000348749 A0A1B0GVG6 124 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 TRAFD1O14545 582 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 NVLO15381 856 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PHF2O75151 1096 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 GOLGA8HP0CJ92 632 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PYGBP11216 843 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 CHRNA3P32297 505 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 VHLP40337 213 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MAGEA8P43361 318 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 RPL21P46778 160 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 POLE2P56282 527 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 KCTD19Q17RG1 926 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MUM1Q2TAK8 710 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 UBAP2Q5T6F2 1119 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 FOXB2Q5VYV0 432 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 TRMT10CQ7L0Y3 403 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC17A8Q8NDX2 589 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 AZIN2Q96A70 460 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 RTFDC1Q9BY42 306 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MYLK2Q9H1R3 596 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 KCTD10Q9H3F6 313 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 STOML1Q9UBI4 398 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PCYOX1Q9UHG3 505 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PCDHA3Q9Y5H8 950 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 SLC37A4O43826 429 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MYBL1P10243 752 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 ALAS1P13196 640 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 UCHL3P15374 230 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 FGFR4P22455 802 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 RASSF2P50749 326 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 OCRLQ01968 901 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 PPATQ06203 517 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 SETDB1Q15047 1291 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 ARHGAP18Q8N392 663 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 MGARPQ8TDB4 240 aa11.08□□□□□ -0.64
CHRNA1-202ENST00000348749 GLG1Q92896 1179 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms