RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SYT11Q9BT88 431 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 SPATC1LQ9H0A9 340 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 ATP6V0A4Q9HBG4 840 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 L1RE1Q9UN81 338 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 A0A0G2JMZ2 1700 aa22.11■■□□□ 1.13
CHRNA3-202ENST00000348639 FTCDO95954 541 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 ADRB2P07550 413 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 H2AFZP0C0S5 128 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 PAFAH1B1P43034 410 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 SNRNP35Q16560 246 aaKnown RBP22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 CCDC181Q5TID7 509 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 H2AFVQ71UI9 128 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 CYFIP1Q7L576 1253 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 SPATA4Q8NEY3 305 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 USP20Q9Y2K6 914 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 ARID2Q68CP9 1835 aa22.1■■□□□ 1.13
CHRNA3-202ENST00000348639 A0A0A6YYK5 440 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 EPHX2P34913 555 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 LNX1Q8TBB1 728 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 U2AF1L4Q8WU68 220 aaKnown RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 MAFBQ9Y5Q3 323 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 GOLGA8IPA6NC78 632 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 GOLGA8JA6NMD2 632 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 MXI1P50539 228 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 KIF22Q14807 665 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 ARHGAP44Q17R89 818 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 USP50Q70EL3 339 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 HDXQ7Z353 690 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 CBWD2Q8IUF1 395 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 IFT74Q96LB3 600 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 UBXN6Q9BZV1 441 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 TMEM117Q9H0C3 514 aa22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 ASCC2Q9H1I8 757 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 RNF216Q9NWF9 866 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-202ENST00000348639 SYNGAP1Q96PV0 1343 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 TULP1O00294 542 aaPredicted RBP22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 EDNRBP24530 442 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 ABCD1P33897 745 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 CCDC70Q6NSX1 233 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 FBXL18Q96ME1 805 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 UBE2TQ9NPD8 197 aaPredicted RBP22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 KCNG1Q9UIX4 513 aa22.08■■□□□ 1.13
CHRNA3-202ENST00000348639 ADGRA3Q8IWK6 1321 aa22.08■■□□□ 1.12
CHRNA3-202ENST00000348639 H0YCG3 227 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 FOXN3O00409 490 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 CFAP221Q4G0U5 840 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 EAPPQ56P03 285 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 BRDTQ58F21 947 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 SLC39A4Q6P5W5 647 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 GLYCTKQ8IVS8 523 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 ZNF302Q9NR11 478 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 ARHGAP28Q9P2N2 729 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 SPDYE5A6NIY4 337 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 CXCL11O14625 94 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 ATP4AP20648 1035 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 NOP2P46087 812 aaKnown RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 MTERF2Q49AM1 385 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 DNAAF5Q86Y56 855 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 ARHGEF19Q8IW93 802 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 MSL3Q8N5Y2 521 aaKnown RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 LRRC57Q8N9N7 239 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 PARD3BQ8TEW8 1205 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 SAAL1Q96ER3 474 aa22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 POLR3FQ9H1D9 316 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-202ENST00000348639 GABPB1Q06547 395 aaPredicted RBP22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 TPCN2Q8NHX9 752 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 TMC2Q8TDI7 906 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 ZNF526Q8TF50 670 aaPredicted RBP22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 OPTNQ96CV9 577 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 MFSD14AQ96MC6 490 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 IGKV6D-21A0A0A0MT36 114 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 SOWAHBA6NEL2 793 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 OATP04181 439 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 GARTP22102 1010 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 GALCP54803 685 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 EMC2Q15006 297 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 LMBR1Q8WVP7 490 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 POMGNT1Q8WZA1 660 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 RUBCNQ92622 972 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 EHD2Q9NZN4 543 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 AGTPBP1Q9UPW5 1226 aa22.06■■□□□ 1.12
CHRNA3-202ENST00000348639 CES2O00748 559 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 LRRN2O75325 713 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 TNFAIP3P21580 790 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 POLGP54098 1239 aaPredicted RBP22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 ENPEPQ07075 957 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 MAP9Q49MG5 647 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 KRT39Q6A163 491 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 TAS1R3Q7RTX0 852 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 ZC3H15Q8WU90 426 aaKnown RBP22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 KCNN1Q92952 543 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 R3HDMLQ9H3Y0 253 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 SMARCAL1Q9NZC9 954 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 COQ4Q9Y3A0 265 aa22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 MYH9P35579 1960 aaKnown RBP22.05■■□□□ 1.12
CHRNA3-202ENST00000348639 LRRIQ3A6PVS8 624 aaPredicted RBP22.04■■□□□ 1.12
CHRNA3-202ENST00000348639 HNRNPDLO14979 420 aaKnown RBP22.04■■□□□ 1.12
CHRNA3-202ENST00000348639 UBA1P22314 1058 aaKnown RBP22.04■■□□□ 1.12
CHRNA3-202ENST00000348639 SMC1AQ14683 1233 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms