RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 VCX3BQ9H321 246 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 TMEM51Q9NW97 253 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUP50-201ENST00000347635 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 XPOTO43592 962 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 DCTN3O75935 186 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 POLR2BP30876 1174 aaKnown RBP15.78■□□□□ 0.12
NUP50-201ENST00000347635 FAM167AQ96KS9 214 aa15.78■□□□□ 0.12
NUP50-201ENST00000347635 A0A087X0T9 212 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 RASA4BC9J798 803 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 RASA4O43374 803 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 FAM228BP0C875 321 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 MYBP10242 640 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 KLRK1P26718 216 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 MSH2P43246 934 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 PADI6Q6TGC4 694 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 DUSP9Q99956 384 aaKnown RBP15.77■□□□□ 0.12
NUP50-201ENST00000347635 GOLPH3Q9H4A6 298 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 INHBAP08476 426 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 CA4P22748 312 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 ZNF449Q6P9G9 518 aa15.77■□□□□ 0.12
NUP50-201ENST00000347635 EPM2AIP1Q7L775 607 aaPredicted RBP15.77■□□□□ 0.12
NUP50-201ENST00000347635 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.12
NUP50-201ENST00000347635 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.11
NUP50-201ENST00000347635 YWHAGP61981 247 aaKnown RBP eCLIP15.77■□□□□ 0.11
NUP50-201ENST00000347635 KRT81Q14533 505 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 CASC4Q6P4E1 433 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 SRRM1Q8IYB3 904 aaKnown RBP15.77■□□□□ 0.11
NUP50-201ENST00000347635 MYCBPAPQ8TBZ2 947 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 ATP2A3Q93084 1043 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 SNF8Q96H20 258 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 MLXIPLQ9NP71 852 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 MYOZ2Q9NPC6 264 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 ADAMTSL3P82987 1691 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 NMT1P30419 496 aaKnown RBP15.77■□□□□ 0.11
NUP50-201ENST00000347635 SPARCL1Q14515 664 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 C3orf20Q8ND61 904 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 SPATA20Q8TB22 786 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 CELF4Q9BZC1 486 aaKnown RBP15.77■□□□□ 0.11
NUP50-201ENST00000347635 TMBIM4Q9HC24 238 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 APEX2Q9UBZ4 518 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 PITPNM2Q9BZ72 1349 aa15.77■□□□□ 0.11
NUP50-201ENST00000347635 LRRIQ4A6NIV6 560 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SYF2O95926 243 aaKnown RBP15.76■□□□□ 0.11
NUP50-201ENST00000347635 BRAFP15056 766 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
NUP50-201ENST00000347635 PEX3P56589 373 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 TPCN2Q8NHX9 752 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 TUBB6Q9BUF5 446 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SAYSD1Q9NPB0 183 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SORBS3O60504 671 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 KRT76Q01546 638 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SCYL3Q8IZE3 742 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 KIAA0895Q8NCT3 520 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SLC40A1Q9NP59 571 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 ARHGAP42A6NI28 874 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 ATP5HO75947 161 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 GLI1P08151 1106 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 IL1R1P14778 569 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 PBX1P40424 430 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 NR1H3Q13133 447 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 MEI1Q5TIA1 1274 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SNRNP48Q6IEG0 339 aaKnown RBP15.76■□□□□ 0.11
NUP50-201ENST00000347635 FAM47EQ6ZV65 393 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 CFAP61Q8NHU2 1237 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 CEP170P1Q96L14 293 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 RMDN3Q96TC7 470 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 ACAD9Q9H845 621 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 RNF146Q9NTX7 359 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 SPATS2LQ9NUQ6 558 aaKnown RBP15.76■□□□□ 0.11
NUP50-201ENST00000347635 TMEM253P0C7T8 217 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 FMO5P49326 533 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 CENPUQ71F23 418 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 RFX6Q8HWS3 928 aa15.76■□□□□ 0.11
NUP50-201ENST00000347635 EIF2AK2P19525 551 aaKnown RBP15.75■□□□□ 0.11
NUP50-201ENST00000347635 GMPSP49915 693 aaPredicted RBP15.75■□□□□ 0.11
NUP50-201ENST00000347635 SDCCAG8Q86SQ7 713 aaPredicted RBP15.75■□□□□ 0.11
NUP50-201ENST00000347635 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 MIS12Q9H081 205 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 INTUQ9ULD6 942 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 SCINQ9Y6U3 715 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 EMSYQ7Z589 1322 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 NFAT5O94916 1531 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 TBX3O15119 743 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 RTN2O75298 545 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 BAG2O95816 211 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 SFNP31947 248 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 DNAJC24Q6P3W2 148 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 JAMLQ86YT9 394 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 HEMGNQ9BXL5 484 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 PACSIN1Q9BY11 444 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 TUFT1Q9NNX1 390 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 FAM196BA6NMK8 535 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 MAP7D1Q3KQU3 841 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 ZNF507Q8TCN5 953 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 ZDHHC15Q96MV8 337 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 THOC1Q96FV9 657 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms