RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CYP26A1O43174 497 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ZNF862O60290 1169 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 STBD1O95210 358 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PYGMP11217 842 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 HPDP32754 393 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 CORO7P57737 925 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SKOR1P84550 965 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 MAP2K1Q02750 393 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TKFCQ3LXA3 575 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 CEP85LQ5SZL2 805 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 LEKR1Q6ZMV7 388 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ARHGAP27Q6ZUM4 889 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 UHMK1Q8TAS1 419 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ZNF516Q92618 1163 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 RNF25Q96BH1 459 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 NUCKS1Q9H1E3 243 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TMBIM4Q9HC24 238 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 NOCTQ9UK39 431 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ALG6Q9Y672 507 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PTPRJQ12913 1337 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TTLL13PA6NNM8 815 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 K7ENM7 598 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 EIF3DO15371 548 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 EXOC3O60645 756 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 FTLP02792 175 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PTGIRP43119 386 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PEX5P50542 639 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 RPS6P62753 249 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PPFIA1Q13136 1202 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SIX1Q15475 284 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 RPUSD2Q8IZ73 545 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 MREGQ8N565 214 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SYTL5Q8TDW5 730 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SEC14L1Q92503 715 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 FAM118BQ9BPY3 351 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SEPT11Q9NVA2 429 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 SUCLA2Q9P2R7 463 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 GTPBP10A4D1E9 387 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GJB6O95452 261 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ALAS1P13196 640 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 DPEP1P16444 411 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 LSP1P33241 339 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 STAT1P42224 750 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PEX3P56589 373 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 SP2Q02086 613 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CXCL9Q07325 125 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PRPF4BQ13523 1007 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 KIF22Q14807 665 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GLE1Q53GS7 698 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PRELID2Q8N945 189 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ZBED3Q96IU2 234 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 AGPAT1Q99943 283 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CENPHQ9H3R5 247 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GRHL1Q9NZI5 618 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 HSPBP1Q9NZL4 362 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 SLC12A6Q9UHW9 1150 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CCPG1Q9ULG6 757 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 NCANO14594 1321 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ARID2Q68CP9 1835 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CREB1P16220 341 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 LIG3P49916 1009 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 MYL7Q01449 175 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 FMO1Q01740 532 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 HLTFQ14527 1009 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ZBTB41Q5SVQ8 909 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CFAP58Q5T655 872 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 FBXW10Q5XX13 1052 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 ALS2CLQ60I27 953 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 EPS8L1Q8TE68 723 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CCDC127Q96BQ5 260 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 NAP1L4Q99733 375 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 SNX24Q9Y343 169 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 UBIAD1Q9Y5Z9 338 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 FAM169AQ9Y6X4 670 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 LOC102724159A0A0B4J2E5 919 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PGRMC1O00264 195 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 HSF2BPO75031 334 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CAND2O75155 1236 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 MYCLP12524 364 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 COMTP21964 271 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 MCM3P25205 808 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 YWHABP31946 246 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 VAMP7P51809 220 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 IFI35P80217 286 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PGM5Q15124 567 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 PWP2Q15269 919 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 DLGAP5Q15398 846 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 SAMD7Q7Z3H4 446 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 FBXO25Q8TCJ0 367 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 HELQQ8TDG4 1101 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 TAS1R2Q8TE23 839 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 CD101Q93033 1021 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms