RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CDY1Q9Y6F8 540 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 PZPP20742 1482 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 KIF22Q14807 665 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 GIMAP8Q8ND71 665 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-201ENST00000345617 HINFPQ9BQA5 517 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 TCIRG1Q13488 830 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 TRIM71Q2Q1W2 868 aaKnown RBP20.51■□□□□ 0.87
HDAC4-201ENST00000345617 RYBPQ8N488 228 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-201ENST00000345617 PALD1Q9ULE6 856 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 hCG_2014768A0A024R1R8 64 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 SLC1A1P43005 524 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 CCDC137Q6PK04 289 aaKnown RBP20.51■□□□□ 0.87
HDAC4-201ENST00000345617 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 EPHB1P54762 984 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 ABHD8Q96I13 439 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 ROR1Q01973 937 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
HDAC4-201ENST00000345617 PLA2G4BP0C869 781 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 KITP10721 976 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 TSPAN17Q96FV3 270 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 EPC1Q9H2F5 836 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 TET3O43151 1660 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 USP44Q9H0E7 712 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 BRD8Q9H0E9 1235 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 ADAMTS1Q9UHI8 967 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 SUPT3HO75486 399 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 PRMT1Q99873 361 aaKnown RBP20.5■□□□□ 0.87
HDAC4-201ENST00000345617 HEATR6Q6AI08 1181 aaKnown RBP20.5■□□□□ 0.87
HDAC4-201ENST00000345617 CCDC103Q8IW40 242 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 KCNV2Q8TDN2 545 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 ABI1Q8IZP0 508 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 DLGAP5Q15398 846 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 UGP2Q16851 508 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 TSSK1BQ9BXA7 367 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 ATG3Q9NT62 314 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 ADAM22Q9P0K1 906 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 FAM32AQ9Y421 112 aaKnown RBP20.5■□□□□ 0.87
HDAC4-201ENST00000345617 GCP02774 474 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 KRT24Q2M2I5 525 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 BTNL9Q6UXG8 535 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 OLFM1Q99784 485 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 PCDHGB4Q9UN71 923 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 AURKCQ9UQB9 309 aa20.5■□□□□ 0.87
HDAC4-201ENST00000345617 PSAPP07602 524 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 ABCB5Q2M3G0 1257 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CDC26Q8NHZ8 85 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CYGBQ8WWM9 190 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 AKT3Q9Y243 479 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 SNTNA6NMZ2 147 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 VHLP40337 213 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 P3H1Q32P28 736 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 OLFML2BQ68BL8 750 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 RRM2BQ7LG56 351 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 TNPO2O14787 897 aaKnown RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 KCNQ4P56696 695 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 AARS2Q5JTZ9 985 aaKnown RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 WLSQ5T9L3 541 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CDKL3Q8IVW4 592 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 GCNAQ96QF7 691 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 RPF1Q9H9Y2 349 aaKnown RBP20.49■□□□□ 0.87
HDAC4-201ENST00000345617 KRT33BQ14525 404 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 FAM107AO95990 144 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CYP4A11Q02928 519 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 CCDC87Q9NVE4 849 aa20.49■□□□□ 0.87
HDAC4-201ENST00000345617 NINQ8N4C6 2090 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 ZSCAN9O15535 394 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CYP27A1Q02318 531 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 KCNA1Q09470 495 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 FBXO31Q5XUX0 539 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CLK1P49759 484 aaKnown RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 TCP10Q12799 353 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 PPP1R18Q6NYC8 613 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 ZFATQ9P243 1243 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 SH2B2O14492 632 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 RALBP11234 206 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 VCAM1P19320 739 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 PSMC3IPQ9P2W1 217 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 VCPP55072 806 aaKnown RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 SZRD1Q7Z422 152 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 HSPH1Q92598 858 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 HEXIM2Q96MH2 286 aaKnown RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 SCN3BQ9NY72 215 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 RHOT1Q8IXI2 618 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 TMC4Q7Z404 712 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 TMEM35BQ8NCS4 154 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CCDC195A0A1B0GUA6 201 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CASP10Q92851 521 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CYP4F11Q9HBI6 524 aa20.48■□□□□ 0.87
HDAC4-201ENST00000345617 CCNA1P78396 465 aa20.47■□□□□ 0.87
HDAC4-201ENST00000345617 ZBED8Q8IZ13 594 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms