RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 ZNF397Q8NF99 534 aaPredicted RBP10.67□□□□□ -0.7
CLDN18-202ENST00000343735 PSPC1Q8WXF1 523 aaKnown RBP10.67□□□□□ -0.7
CLDN18-202ENST00000343735 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 RNPEPQ9H4A4 650 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 RABEP2Q9H5N1 569 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 PAXBP1Q9Y5B6 917 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 CCDC169A6NNP5 214 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 SRGAP2O75044 1071 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 GNA14O95837 355 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 RPLP2P05387 115 aaKnown RBP10.67□□□□□ -0.7
CLDN18-202ENST00000343735 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 ARL2P36404 184 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 PEX3P56589 373 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 FKBP3Q00688 224 aaKnown RBP10.67□□□□□ -0.7
CLDN18-202ENST00000343735 MFSD10Q14728 455 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 CSGALNACT2Q8N6G5 542 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 SCFD1Q8WVM8 642 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 C2orf40Q9H1Z8 148 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 TYW1Q9NV66 732 aaKnown RBP10.67□□□□□ -0.7
CLDN18-202ENST00000343735 KRT9P35527 623 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 PSEN2P49810 448 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 EFNA5P52803 228 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 GTF2BQ00403 316 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 SYCP3Q8IZU3 236 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 DEPTORQ8TB45 409 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 CEP63Q96MT8 703 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 XPNPEP1Q9NQW7 623 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
CLDN18-202ENST00000343735 INHAP05111 366 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 MYBPC2Q14324 1141 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 NFIL3Q16649 462 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 KIAA0753Q2KHM9 967 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 TTI2Q6NXR4 508 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 C10orf67Q8IYJ2 551 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 LCMT1Q9UIC8 334 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 HAS3O00219 553 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 TRIM21P19474 475 aaKnown RBP10.66□□□□□ -0.7
CLDN18-202ENST00000343735 EEF1GP26641 437 aaKnown RBP10.66□□□□□ -0.7
CLDN18-202ENST00000343735 TNNT3P45378 269 aaPredicted RBP10.66□□□□□ -0.7
CLDN18-202ENST00000343735 NPTX2P47972 431 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 STRN3Q13033 797 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 KRT31Q15323 416 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 GRIK4Q16099 956 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 FILIP1LQ4L180 1135 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
CLDN18-202ENST00000343735 SEZ6LQ9BYH1 1024 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 SMARCAL1Q9NZC9 954 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 HDAC6Q9UBN7 1215 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 FEZ2Q9UHY8 353 aaPredicted RBP10.66□□□□□ -0.7
CLDN18-202ENST00000343735 PPP2R2CQ9Y2T4 447 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 WDR81Q562E7 1941 aa10.66□□□□□ -0.7
CLDN18-202ENST00000343735 MYBP10242 640 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 KLRC1P26715 233 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 CCND3P30281 292 aaPredicted RBP10.65□□□□□ -0.7
CLDN18-202ENST00000343735 NMT1P30419 496 aaKnown RBP10.65□□□□□ -0.7
CLDN18-202ENST00000343735 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
CLDN18-202ENST00000343735 TCERG1LQ5VWI1 586 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 ANKRD40Q6AI12 368 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 ZBTB8OSQ8IWT0 167 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 DNAJC5GQ8N7S2 189 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 C7orf31Q8N865 590 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 STRA6Q9BX79 667 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 GBP3Q9H0R5 595 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 TMEM134Q9H6X4 195 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 SUCLA2Q9P2R7 463 aaPredicted RBP10.65□□□□□ -0.7
CLDN18-202ENST00000343735 ZBTB42B2RXF5 422 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 CETN3O15182 167 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 C22orf31O95567 290 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 CAP1Q01518 475 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 SPECC1LQ69YQ0 1117 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 MTHFD1LQ6UB35 978 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 RAD9BQ6WBX8 426 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 METTL13Q8N6R0 699 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 UBXN4Q92575 508 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 TMEM143Q96AN5 459 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 FIZ1Q96SL8 496 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 KCTD10Q9H3F6 313 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 PTCH2Q9Y6C5 1203 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.7
CLDN18-202ENST00000343735 KCNJ18B7U540 433 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 PPP1R37O75864 691 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 PRPF6O94906 941 aaKnown RBP10.65□□□□□ -0.71
CLDN18-202ENST00000343735 CASQ1P31415 396 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 CXCR5P32302 372 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 TRIM32Q13049 653 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 KCNJ12Q14500 433 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 PKN2Q16513 984 aaKnown RBP10.65□□□□□ -0.71
CLDN18-202ENST00000343735 VSTM4Q8IW00 320 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 KLHDC9Q8NEP7 349 aa10.65□□□□□ -0.71
CLDN18-202ENST00000343735 TMEM174Q8WUU8 243 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms