RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ZNF571Q7Z3V5 609 aaPredicted RBP20.22■□□□□ 0.83
HOXA9-201ENST00000343483 SAAL1Q96ER3 474 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 GSTTP1A0A1W2PQM5 241 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 PJA2O43164 708 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 TGFB3P10600 412 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 CYP2C8P10632 490 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 GCLMP48507 274 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 HNRNPLLQ8WVV9 542 aaKnown RBP20.22■□□□□ 0.83
HOXA9-201ENST00000343483 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 CAPZA3Q96KX2 299 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 MMS19Q96T76 1030 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 FUT8Q9BYC5 575 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 ZMYND15Q9H091 742 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 DNAJC12Q9UKB3 198 aa20.22■□□□□ 0.83
HOXA9-201ENST00000343483 IGKV6D-21A0A0A0MT36 114 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 HNRNPDLO14979 420 aaKnown RBP20.21■□□□□ 0.83
HOXA9-201ENST00000343483 ERLIN1O75477 346 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 GFPT2O94808 682 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 CKAP4Q07065 602 aaKnown RBP20.21■□□□□ 0.83
HOXA9-201ENST00000343483 PPP3CAQ08209 521 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 CETN1Q12798 172 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 SNRNP35Q16560 246 aaKnown RBP20.21■□□□□ 0.83
HOXA9-201ENST00000343483 CBWD2Q8IUF1 395 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 BICD1Q96G01 975 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 FGD4Q96M96 766 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 ALS2CR12Q96Q35 445 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 APEX2Q9UBZ4 518 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 SALL4Q9UJQ4 1053 aa20.21■□□□□ 0.83
HOXA9-201ENST00000343483 TMEM88BA6NKF7 163 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 F8VZ95 297 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 ADRB2P07550 413 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 STAT1P42224 750 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 NAP1L1P55209 391 aaKnown RBP20.2■□□□□ 0.82
HOXA9-201ENST00000343483 ERVK-9P63128 1117 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 METTL7BQ6UX53 244 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 PLEKHO2Q8TD55 490 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 SLC7A3Q8WY07 619 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 POMGNT1Q8WZA1 660 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 PCYT2Q99447 389 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 MROH8Q9H579 483 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 MAPK13O15264 365 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
HOXA9-201ENST00000343483 ARIH2O95376 493 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 TCF7P36402 384 aaPredicted RBP20.2■□□□□ 0.82
HOXA9-201ENST00000343483 PRKCIP41743 596 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 STAT5BP51692 787 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 DRAP1Q14919 205 aaPredicted RBP20.2■□□□□ 0.82
HOXA9-201ENST00000343483 KIAA0753Q2KHM9 967 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 CAGE1Q8TC20 777 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 JRKLQ9Y4A0 524 aa20.2■□□□□ 0.82
HOXA9-201ENST00000343483 ARID2Q68CP9 1835 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 DNAJC25-GNG10A0A024R161 153 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 BUB1O43683 1085 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 TUBBP07437 444 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 FERP16591 822 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 SOX5P35711 763 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 VSNL1P62760 191 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
HOXA9-201ENST00000343483 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 FAM160B1Q5W0V3 765 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 CCDC127Q96BQ5 260 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 NOX5Q96PH1 765 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 PACSIN1Q9BY11 444 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 DHX33Q9H6R0 707 aaKnown RBP20.19■□□□□ 0.82
HOXA9-201ENST00000343483 ARHGAP28Q9P2N2 729 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
HOXA9-201ENST00000343483 ABT1Q9ULW3 272 aaKnown RBP20.19■□□□□ 0.82
HOXA9-201ENST00000343483 H0YCG3 227 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 TERF2Q15554 542 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 BEND6Q5SZJ8 279 aaPredicted RBP20.18■□□□□ 0.82
HOXA9-201ENST00000343483 PHLDB3Q6NSJ2 640 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
HOXA9-201ENST00000343483 VPS36Q86VN1 386 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 FBXO16Q8IX29 292 aaPredicted RBP20.18■□□□□ 0.82
HOXA9-201ENST00000343483 LMO3Q8TAP4 145 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 NIFKQ9BYG3 293 aaKnown RBP20.18■□□□□ 0.82
HOXA9-201ENST00000343483 PORCNQ9H237 461 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 WDR81Q562E7 1941 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 ZNF185O15231 689 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 EVI5O60447 810 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 MXI1P50539 228 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 ARHGAP44Q17R89 818 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
HOXA9-201ENST00000343483 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 AZI2Q9H6S1 392 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 ABCB6Q9NP58 842 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 NRBP2Q9NSY0 501 aa20.18■□□□□ 0.82
HOXA9-201ENST00000343483 LRRIQ4A6NIV6 560 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 NOP56O00567 594 aaKnown RBP20.17■□□□□ 0.82
HOXA9-201ENST00000343483 RNF10Q8N5U6 811 aaKnown RBP20.17■□□□□ 0.82
HOXA9-201ENST00000343483 ASAP3Q8TDY4 903 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 P4HA2O15460 535 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 LRRN2O75325 713 aa20.17■□□□□ 0.82
HOXA9-201ENST00000343483 KLRC1P26715 233 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms