RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 ZNF18P17022 549 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 THPOP40225 353 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 TPD52L1Q16890 204 aaPredicted RBP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 BMT2Q1RMZ1 405 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 TRIM71Q2Q1W2 868 aaKnown RBP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 HSP90AA4PQ58FG1 418 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 TMEM240Q5SV17 173 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 ODR4Q5SWX8 454 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 CDKAL1Q5VV42 579 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 ANKRD40Q6AI12 368 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 CENPPQ6IPU0 288 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 GPR153Q6NV75 609 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 C16orf59Q7L2K0 433 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 RPAINQ86UA6 219 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 NELFCDQ8IXH7 590 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 FAM178BQ8IXR5 827 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 MCPH1Q8NEM0 835 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 SCLYQ96I15 445 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 DUSP9Q99956 384 aaKnown RBP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 POLR3FQ9H1D9 316 aaPredicted RBP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 LARSQ9P2J5 1176 aaKnown RBP9.56□□□□□ -0.88
NLRC4-201ENST00000342905 UBE4BO95155 1302 aa9.56□□□□□ -0.88
NLRC4-201ENST00000342905 COL1A2P08123 1366 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 K7ENM7 598 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 EIF3DO15371 548 aaKnown RBP eCLIP9.55□□□□□ -0.88
NLRC4-201ENST00000342905 HBP1O60381 514 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 PPP1R37O75864 691 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ADCY5O95622 1261 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 FGBP02675 491 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ACRP10323 421 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 MAPTP10636 758 aaKnown RBP9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ACTN1P12814 892 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 INSRRP14616 1297 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 HOXD13P35453 343 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 RFC5P40937 340 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 NCKAP1LP55160 1127 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 PEX3P56589 373 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ZCWPW2Q504Y3 356 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
NLRC4-201ENST00000342905 RASIP1Q5U651 963 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF365Q70YC5 407 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF720Q7Z2F6 126 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 RSPH3Q86UC2 560 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 KSR1Q8IVT5 923 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF507Q8TCN5 953 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 TRAPPC12Q8WVT3 735 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 HERVK_113Q902F9 699 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 WNT8BQ93098 351 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 STRA6Q9BX79 667 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 KCTD10Q9H3F6 313 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 PPME1Q9Y570 386 aa9.55□□□□□ -0.88
NLRC4-201ENST00000342905 TDRD15B5MCY1 1934 aaKnown RBP9.55□□□□□ -0.88
NLRC4-201ENST00000342905 SOX1O00570 391 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-201ENST00000342905 SLC16A4O15374 487 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 MAFO75444 373 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-201ENST00000342905 BAIAP3O94812 1187 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 KIF20AO95235 890 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 CXCL10P02778 98 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF75DP51815 510 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 IGBP1P78318 339 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 SMAD3P84022 425 aaKnown RBP9.54□□□□□ -0.88
NLRC4-201ENST00000342905 FANCCQ00597 558 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 LRRC63Q05C16 580 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 KCNA1Q09470 495 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF484Q5JVG2 852 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ZNF618Q5T7W0 954 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 FOXR2Q6PJQ5 311 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 DEFB128Q7Z7B8 93 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 IRF2BP1Q8IU81 584 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ASAP3Q8TDY4 903 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
NLRC4-201ENST00000342905 TMEM143Q96AN5 459 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 VWCEQ96DN2 955 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 PDLIM2Q96JY6 352 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 TSG101Q99816 390 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 SRRTQ9BXP5 876 aaKnown RBP9.54□□□□□ -0.88
NLRC4-201ENST00000342905 TRIM5Q9C035 493 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 IFNKQ9P0W0 207 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 ADGRA3Q8IWK6 1321 aa9.54□□□□□ -0.88
NLRC4-201ENST00000342905 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 NBNO60934 754 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 C22orf31O95567 290 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 HOXB1P14653 301 aaPredicted RBP9.53□□□□□ -0.88
NLRC4-201ENST00000342905 CDK11BP21127 795 aaKnown RBP9.53□□□□□ -0.88
NLRC4-201ENST00000342905 ARL2P36404 184 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 NPTX2P47972 431 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 CCDC173Q0VFZ6 552 aa9.53□□□□□ -0.88
NLRC4-201ENST00000342905 DMP1Q13316 513 aaPredicted RBP9.53□□□□□ -0.88
NLRC4-201ENST00000342905 DRP2Q13474 957 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms