RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RAB21Q9UL25 225 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SSX2IPQ9Y2D8 614 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 AK9Q5TCS8 1911 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RSPH10B2B2RC85 870 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 ZBTB22O15209 634 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 TJP3O95049 919 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RSPH10BP0C881 870 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 LRRC14Q15048 493 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SURF1Q15526 300 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 STXBP2Q15833 593 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SCFD1Q8WVM8 642 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MTMR8Q96EF0 704 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 APOL6Q9BWW8 343 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 AKT3Q9Y243 479 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SLC26A4O43511 780 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SASH3O75995 380 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 PSMA2P25787 234 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 CASP4P49662 377 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MAPK6Q16659 721 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 KCTD6Q8NC69 237 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 CDKL2Q92772 493 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 PNMA5Q96PV4 448 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 WRNIP1Q96S55 665 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RIT2Q99578 217 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 CELF4Q9BZC1 486 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 ZWILCHQ9H900 591 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RTN2O75298 545 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MARK3P27448 753 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 YWHABP31946 246 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 NPEPPSP55786 919 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 ENOSF1Q7L5Y1 443 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RHOT1Q8IXI2 618 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 VCXQ9H320 206 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 BLOC1S4Q9NUP1 217 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MED7O43513 233 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SLC12A2P55011 1212 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 RNASELQ05823 741 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 ZNF449Q6P9G9 518 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 RNF169Q8NCN4 708 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SLC30A5Q8TAD4 765 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 PPP4R1Q8TF05 950 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 MYCBPQ99417 103 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 PACSIN1Q9BY11 444 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 ZBTB12Q9Y330 459 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 ITSN1Q15811 1721 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 PRPSAP2O60256 369 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 LSP1P33241 339 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 PDZD4Q76G19 769 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 JAMLQ86YT9 394 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 DCPSQ96C86 337 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 ISCUQ9H1K1 167 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 CARD9Q9H257 536 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 FBXO28Q9NVF7 368 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 KCND2Q9NZV8 630 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 DCCP43146 1447 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 PABPN1LA6NDY0 278 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 CAV1Q03135 178 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 CYFIP1Q7L576 1253 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 ARL8AQ96BM9 186 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 HVCN1Q96D96 273 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 RUSC1Q9BVN2 902 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 ZNF446Q9NWS9 450 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 UVRAGQ9P2Y5 699 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 AKAP3O75969 853 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 NR3C2P08235 984 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 KCNJ1P48048 391 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 BAATQ14032 418 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 GPD1LQ8N335 351 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 KCTD17Q8N5Z5 321 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SMC1BQ8NDV3 1235 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 GABPB2Q8TAK5 448 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 FAM151AQ8WW52 585 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 HEXIM2Q96MH2 286 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 IFT122Q9HBG6 1241 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 AGPAT3Q9NRZ7 376 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SEPT10Q9P0V9 454 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 CHORDC1Q9UHD1 332 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 AGO2Q9UKV8 859 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 TXNDC9O14530 226 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 FOXP2O15409 715 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 FGFR4P22455 802 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 GNA15P30679 374 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SPARCL1Q14515 664 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 PSMD6Q15008 389 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 CCNYQ8ND76 341 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 PSPC1Q8WXF1 523 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 ERP44Q9BS26 406 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 POLR3FQ9H1D9 316 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 RPF1Q9H9Y2 349 aaKnown RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 HOXC10Q9NYD6 342 aa7.68□□□□□ -1.18
VCAN-202ENST00000342785 SUCLA2Q9P2R7 463 aaPredicted RBP7.68□□□□□ -1.18
VCAN-202ENST00000342785 BAG2O95816 211 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 CPP00450 1065 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 CALB1P05937 261 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms