RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ARHGEF35A5YM69 484 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 NT5C1B-RDH14C9J2C7 533 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 MBTPS2O43462 519 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 TSPAN1O60635 241 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 MUTP22033 750 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 CCT6AP40227 531 aaKnown RBP22.37■■□□□ 1.17
SYNE2-201ENST00000341472 SMAD4Q13485 552 aaKnown RBP22.37■■□□□ 1.17
SYNE2-201ENST00000341472 BMS1Q14692 1282 aaKnown RBP22.37■■□□□ 1.17
SYNE2-201ENST00000341472 DUSP6Q16828 381 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 NOTUMQ6P988 496 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 POTEGQ6S5H5 508 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 PADI6Q6TGC4 694 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 TMEM169Q96HH4 297 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 MSLNLQ96KJ4 702 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 NFKBIZQ9BYH8 718 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 NRDE2Q9H7Z3 1164 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 UBN1Q9NPG3 1134 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 GPRC5CQ9NQ84 441 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 KANSL3Q9P2N6 904 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 PRKAG3Q9UGI9 489 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 PCDHB6Q9Y5E3 794 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 STK24Q9Y6E0 443 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 RALGAPA2Q2PPJ7 1873 aa22.37■■□□□ 1.17
SYNE2-201ENST00000341472 FSD2A1L4K1 749 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 ZC3H11AO75152 810 aaKnown RBP eCLIP22.36■■□□□ 1.17
SYNE2-201ENST00000341472 ITGA4P13612 1032 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 CYP11B2P19099 503 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 NCLP19338 710 aaKnown RBP22.36■■□□□ 1.17
SYNE2-201ENST00000341472 MBTD1Q05BQ5 628 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 SMAD2Q15796 467 aaKnown RBP22.36■■□□□ 1.17
SYNE2-201ENST00000341472 HAUS3Q68CZ6 603 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 MRPL43Q8N983 215 aaKnown RBP22.36■■□□□ 1.17
SYNE2-201ENST00000341472 TBC1D32Q96NH3 1257 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 C1QTNF1Q9BXJ1 281 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 RAB34Q9BZG1 259 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 CSRNP2Q9H175 543 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 EPHX3Q9H6B9 360 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
SYNE2-201ENST00000341472 CNTNAP2Q9UHC6 1331 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 H3BQV1 296 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 CD2BP2O95400 341 aaKnown RBP22.35■■□□□ 1.17
SYNE2-201ENST00000341472 EYA4O95677 639 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 GALTP07902 379 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 GJB2P29033 226 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 CPB2Q96IY4 423 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 FAM193BQ96PV7 902 aaPredicted RBP22.35■■□□□ 1.17
SYNE2-201ENST00000341472 GBP3Q9H0R5 595 aa22.35■■□□□ 1.17
SYNE2-201ENST00000341472 LRRIQ4A6NIV6 560 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 HIDE1A8MVS5 230 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 LAD1O00515 517 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 CXCL14O95715 111 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 ALDH2P05091 517 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 COASYQ13057 564 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 SMC1AQ14683 1233 aaKnown RBP22.34■■□□□ 1.17
SYNE2-201ENST00000341472 AMHR2Q16671 573 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 DTHD1Q6ZMT9 781 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 ZNF280BQ86YH2 543 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 ADHFE1Q8IWW8 467 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 SMG8Q8ND04 991 aaKnown RBP22.34■■□□□ 1.17
SYNE2-201ENST00000341472 IGSF21Q96ID5 467 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 EIF2AQ9BY44 585 aaKnown RBP22.34■■□□□ 1.17
SYNE2-201ENST00000341472 BARX2Q9UMQ3 279 aaPredicted RBP22.34■■□□□ 1.17
SYNE2-201ENST00000341472 KIAA1024Q9UPX6 916 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 IPPQ9Y573 584 aa22.34■■□□□ 1.17
SYNE2-201ENST00000341472 WDR81Q562E7 1941 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 NLRC5Q86WI3 1866 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 GLP2RO95838 553 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 ARF4P18085 180 aaPredicted RBP22.33■■□□□ 1.17
SYNE2-201ENST00000341472 AFF1P51825 1210 aaKnown RBP22.33■■□□□ 1.17
SYNE2-201ENST00000341472 ZP2Q05996 745 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 ECM1Q16610 540 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 RILPL1Q5EBL4 403 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 ZBTB8OSQ8IWT0 167 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 HACE1Q8IYU2 909 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 VPS52Q8N1B4 723 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 TRIM6Q9C030 488 aaPredicted RBP22.33■■□□□ 1.17
SYNE2-201ENST00000341472 RNF39Q9H2S5 420 aa22.33■■□□□ 1.17
SYNE2-201ENST00000341472 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.33■■□□□ 1.17
SYNE2-201ENST00000341472 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.33■■□□□ 1.17
SYNE2-201ENST00000341472 DDHD2O94830 711 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 POMCP01189 267 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 SRGAP2BP0DMP2 458 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 SLC11A1P49279 550 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 RBM10P98175 930 aaKnown RBP22.32■■□□□ 1.16
SYNE2-201ENST00000341472 KRT79Q5XKE5 535 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 TMEM184AQ6ZMB5 413 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 DDX53Q86TM3 631 aaKnown RBP22.32■■□□□ 1.16
SYNE2-201ENST00000341472 IGSF22Q8N9C0 903 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 TMEM87AQ8NBN3 555 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 VN1R2Q8NFZ6 395 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 KHSRPQ92945 711 aaKnown RBP eCLIP22.32■■□□□ 1.16
SYNE2-201ENST00000341472 C2orf40Q9H1Z8 148 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 DNAJB4Q9UDY4 337 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 FAN1Q9Y2M0 1017 aa22.32■■□□□ 1.16
SYNE2-201ENST00000341472 A0A1B0GUA9 196 aa22.31■■□□□ 1.16
SYNE2-201ENST00000341472 C2orf71A6NGG8 1288 aa22.31■■□□□ 1.16
SYNE2-201ENST00000341472 C19orf67A6NJJ6 358 aa22.31■■□□□ 1.16
SYNE2-201ENST00000341472 PI4K2BG5E9Z4 385 aa22.31■■□□□ 1.16
SYNE2-201ENST00000341472 B4GALT5O43286 388 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms