RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 G3BP2Q9UN86 482 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 THAP12O43422 761 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 DSG3P32926 999 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 MUM1L1Q5H9M0 696 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 HHATQ5VTY9 493 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 HAUS3Q68CZ6 603 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 VPS52Q8N1B4 723 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 AFG3L2Q9Y4W6 797 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 DOCK5Q9H7D0 1870 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 GOLGA8MH3BSY2 632 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 PLA2G6O60733 806 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 MYBL2P10244 700 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 RCN2Q14257 317 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 NT5DC1Q5TFE4 455 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 CCNI2Q6ZMN8 369 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 FAM114A2Q9NRY5 505 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 CPSF2Q9P2I0 782 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 ARHGEF35A5YM69 484 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTECB2RU33 542 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 OSBPP22059 807 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 SREBF1P36956 1147 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CYTH2Q99418 400 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 BHMT2Q9H2M3 363 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 GCNT4Q9P109 453 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 RIPK3Q9Y572 518 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 FGFR4P22455 802 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 POLE2P56282 527 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 FKBP3Q00688 224 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 PPATQ06203 517 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 GJB7Q6PEY0 223 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 SEPT14Q6ZU15 432 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 STMN2Q93045 179 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CCT8L2Q96SF2 557 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 CCSER1Q9C0I3 900 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 MMEP08473 750 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 HNRNPH1P31943 449 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 NLRP14Q86W24 1093 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-201ENST00000341394 TTI1O43156 1089 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 KCNJ1P48048 391 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 NEDD9Q14511 834 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 GLYCTKQ8IVS8 523 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 PACSIN1Q9BY11 444 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 R3HDMLQ9H3Y0 253 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 ACAD9Q9H845 621 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 LCTP09848 1927 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 PPP1R3GB7ZBB8 358 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 F5H423 210 aaPredicted RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 CD19P15391 556 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 GRB10Q13322 594 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 TMED2Q15363 201 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 FMO2Q99518 471 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 BCAS3Q9H6U6 928 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 GBA2Q9HCG7 927 aaPredicted RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 AGTPBP1Q9UPW5 1226 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 COL4A3BPQ9Y5P4 624 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 PGRMC1O00264 195 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 NKRFO15226 690 aaKnown RBP eCLIP11.24□□□□□ -0.615e-6■■■■□ 23
CAPRIN1-201ENST00000341394 HIP1RO75146 1068 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 C2CD6Q53TS8 623 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 IL31RAQ8NI17 732 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 DCTN4Q9UJW0 460 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 SNAPC2Q13487 334 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 PDIA5Q14554 519 aa11.24□□□□□ -0.61
CAPRIN1-201ENST00000341394 FAM178BQ8IXR5 827 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms