RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCL15Q16663 113 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 PNMA8AQ86V59 439 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 NOA1Q8NC60 698 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 POMGNT1Q8WZA1 660 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 UBXN4Q92575 508 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 GLG1Q92896 1179 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 INTS2Q9H0H0 1204 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ST6GALNAC4Q9H4F1 302 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 RNF216Q9NWF9 866 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 MYO6Q9UM54 1294 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 PACSIN2Q9UNF0 486 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 UBE4BO95155 1302 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ZBTB42B2RXF5 422 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 CELF2O95319 508 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 OSBPP22059 807 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC18A3Q16572 532 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 KIAA0753Q2KHM9 967 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 CST9Q5W186 159 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 METTL7BQ6UX53 244 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 RSRC2Q7L4I2 434 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 COG1Q8WTW3 980 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 SYN2Q92777 582 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 KIFAP3Q92845 792 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 SECISBP2LQ93073 1101 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 BICD1Q96G01 975 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 MMS19Q96T76 1030 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 GPR20Q99678 358 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 FAM213AQ9BRX8 229 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 PI4K2AQ9BTU6 479 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 UBE2TQ9NPD8 197 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF446Q9NWS9 450 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ARHGAP28Q9P2N2 729 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 CHORDC1Q9UHD1 332 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 LRRIQ3A6PVS8 624 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 F8VZ95 297 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 DDX3XO00571 662 aaKnown RBP eCLIP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC25A27O95847 323 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TXNP10599 105 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ADORA2AP29274 412 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NAP1L1P55209 391 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 HSP90AA2PQ14568 343 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 CELF3Q5SZQ8 465 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 CDR2LQ86X02 465 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TMEM130Q8N3G9 435 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 GOLGA5Q8TBA6 731 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 PARD3BQ8TEW8 1205 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 PRPF31Q8WWY3 499 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SEPT1Q8WYJ6 367 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 PPP1R16BQ96T49 567 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TARS2Q9BW92 718 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 RNPEPQ9H4A4 650 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NMRK2Q9NPI5 230 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TAS2R14Q9NYV8 317 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 APEX2Q9UBZ4 518 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 LOC285556D6RIA3 1793 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 DOCK3Q8IZD9 2030 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 A0A0G2JMZ2 1700 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 GTPBP10A4D1E9 387 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 EFCAB8A8MWE9 144 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SEC31AO94979 1220 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TGFB3P10600 412 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 KRT13P13646 458 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ARL2P36404 184 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NLRP11P59045 1033 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 CHMP4BP1P59074 171 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 IRX5P78411 483 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NEDD9Q14511 834 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 PPP2R5AQ15172 486 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NFRKBQ6P4R8 1299 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ZNF662Q6ZS27 426 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 INTS8Q75QN2 995 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ARMCX2Q7L311 632 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 EHBP1Q8NDI1 1231 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 MCPH1Q8NEM0 835 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 LNX1Q8TBB1 728 aaPredicted RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 TAS1R2Q8TE23 839 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC20A1Q8WUM9 679 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SPIRE2Q8WWL2 714 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NAGPAQ9UK23 515 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 FTCDO95954 541 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 RHOXF2BP0C7M4 288 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 HARSP12081 509 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 CLCN6P51797 869 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 ALKBH5Q6P6C2 394 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 SRGAP1Q7Z6B7 1085 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 C12orf56Q8IXR9 622 aa8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
SRFBP1-201ENST00000339397 GPRC5AQ8NFJ5 357 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms