RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 INTUQ9ULD6 942 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 MYH4Q9Y623 1939 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 H0Y3Z8 333 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 NOL4O94818 638 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
DFFB-202ENST00000339350 DMPKQ09013 629 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 NR1H4Q96RI1 486 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 RAD51CO43502 376 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 EDIL3O43854 480 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 ACADSP16219 412 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 KCNA3P22001 575 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 ITIH4Q14624 930 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 AZIN2Q96A70 460 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 KCNK3O14649 394 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 GSTA2P09210 222 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.24
DFFB-202ENST00000339350 SLC16A2P36021 539 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 BTDP43251 543 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 COASYQ13057 564 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 PICALMQ13492 652 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 RCN2Q14257 317 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 MUM1Q2TAK8 710 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 IRGCQ6NXR0 463 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 FAM47EQ6ZV65 393 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 SESTD1Q86VW0 696 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 MREGQ8N565 214 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 WDR60Q8WVS4 1066 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 RAD54LQ92698 747 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.24
DFFB-202ENST00000339350 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.24
DFFB-202ENST00000339350 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 TSKSQ9UJT2 592 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 CD2APQ9Y5K6 639 aa13.52□□□□□ -0.24
DFFB-202ENST00000339350 CALB2P22676 271 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 LRRC34Q8IZ02 419 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.25
DFFB-202ENST00000339350 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.25
DFFB-202ENST00000339350 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
DFFB-202ENST00000339350 FAM136AQ96C01 138 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 ZNF653Q96CK0 615 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
DFFB-202ENST00000339350 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 RNPEPL1Q9HAU8 725 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
DFFB-202ENST00000339350 HSFX1Q9UBD0 423 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 DAAM1Q9Y4D1 1078 aa13.52□□□□□ -0.25
DFFB-202ENST00000339350 TMEM247A6NEH6 219 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 LCA5LO95447 670 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 BAG3O95817 575 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 TMEM53Q6P2H8 277 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 MTMR9Q96QG7 549 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 TSG101Q99816 390 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 COL4A3BPQ9Y5P4 624 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 UFL1O94874 794 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 PRLRP16471 622 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 HSD17B3P37058 310 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 EPS15P42566 896 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 COPS2P61201 443 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 RCN1Q15293 331 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 ERMARDQ5T6L9 678 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
DFFB-202ENST00000339350 OSBPL10Q9BXB5 764 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 GDF3Q9NR23 364 aa13.51□□□□□ -0.25
DFFB-202ENST00000339350 A0A0J9YVX5 310 aa13.5□□□□□ -0.25
DFFB-202ENST00000339350 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
DFFB-202ENST00000339350 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
DFFB-202ENST00000339350 PTDSS1P48651 473 aaKnown RBP13.5□□□□□ -0.25
DFFB-202ENST00000339350 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
DFFB-202ENST00000339350 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms