RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PTK2Q05397 1052 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 PLCB4Q15147 1175 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 BRDTQ58F21 947 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 LRRC71Q8N4P6 559 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 BBXQ8WY36 941 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 CARD6Q9BX69 1037 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 ZBTB42B2RXF5 422 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 ADCYAP1R1P41586 468 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 MAGEA1P43355 309 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 NAMPTP43490 491 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 JAM2P57087 298 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 PRPF31Q8WWY3 499 aaKnown RBP24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 FBXL5Q9UKA1 691 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 DNAJC12Q9UKB3 198 aa24.39■■□□□ 1.5
PDLIM2-203ENST00000339162 A0A087X0T9 212 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 CTAGE9A4FU28 777 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM228BP0C875 321 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 LIG4P49917 911 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF157P51786 506 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 ARHGAP1Q07960 439 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 NCBP1Q09161 790 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 CAPSQ13938 189 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 HSP90AA2PQ14568 343 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 LMO3Q8TAP4 145 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 ATP8B4Q8TF62 1192 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM167AQ96KS9 214 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM213AQ9BRX8 229 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 TRPC6Q9Y210 931 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 DIS3Q9Y2L1 958 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 MRFAP1Q9Y605 127 aa24.39■■□□□ 1.49
PDLIM2-203ENST00000339162 K7ERI5 159 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ENC1O14682 589 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 SNAI1O95863 264 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 TFRCP02786 760 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 EDN1P05305 212 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 STRN3Q13033 797 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM110CQ1W6H9 321 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 PHLDB3Q6NSJ2 640 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 PLPPR4Q7Z2D5 763 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF710Q8N1W2 664 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ZBTB45Q96K62 511 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM84AQ96KN4 292 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 TMEM117Q9H0C3 514 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 TOPORSQ9NS56 1045 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 MYO1AQ9UBC5 1043 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 PLXNA1Q9UIW2 1896 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 LOC102724159A0A0B4J2E5 919 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 GFPT2O94808 682 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 MKRN4PQ13434 485 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 PWP2Q15269 919 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 MAMDC4Q6UXC1 1216 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF662Q6ZS27 426 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF571Q7Z3V5 609 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ABRAQ8N0Z2 381 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 EHBP1Q8NDI1 1231 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ERO1AQ96HE7 468 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF668Q96K58 619 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 APEX2Q9UBZ4 518 aa24.38■■□□□ 1.49
PDLIM2-203ENST00000339162 H0YCG3 227 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 IGF2BP3O00425 579 aaKnown RBP eCLIP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 MAPK13O15264 365 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 MAP2K1Q02750 393 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 ARHGAP44Q17R89 818 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 PARD3BQ8TEW8 1205 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 NAPGQ99747 312 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 RNPEPQ9H4A4 650 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 LRRIQ3A6PVS8 624 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 GRB14Q14449 540 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 DRAP1Q14919 205 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 PLEKHH3Q7Z736 793 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 GPD1LQ8N335 351 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 TARS2Q9BW92 718 aaKnown RBP24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 SMARCAD1Q9H4L7 1026 aa24.37■■□□□ 1.49
PDLIM2-203ENST00000339162 GJB1P08034 283 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 SRGAP2CP0DJJ0 459 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 DLATP10515 647 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 MXI1P50539 228 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 SLC18A3Q16572 532 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 CHADLQ6NUI6 762 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 DNAAF5Q86Y56 855 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 MAML3Q96JK9 1138 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 FBXL18Q96ME1 805 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 HAPLN2Q9GZV7 340 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 KATNBL1Q9H079 304 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 VTA1Q9NP79 307 aa24.36■■□□□ 1.49
PDLIM2-203ENST00000339162 F8VZ95 297 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 RASAL3Q86YV0 1011 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 NPLOC4Q8TAT6 608 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 ELMO3Q96BJ8 720 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 GPR88Q9GZN0 384 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 ANKFY1Q9P2R3 1169 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 SALL4Q9UJQ4 1053 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 TTLL13PA6NNM8 815 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 RBAK-RBAKDNI3L0D1 243 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 GARTP22102 1010 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 ACOT2P49753 483 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 EPC2Q52LR7 807 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 ARHGEF19Q8IW93 802 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms