RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DLK2Q6UY11 383 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 EPM2AIP1Q7L775 607 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 TRIM59Q8IWR1 403 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 ZNF280CQ8ND82 737 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 TEKT3Q9BXF9 490 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 KCNH7Q9NS40 1196 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 BTNL10A8MVZ5 291 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 SART1O43290 800 aaKnown RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 POLR2FP61218 127 aaKnown RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 MAGOHP61326 146 aaKnown RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 C1orf186Q6ZWK4 172 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 MYCT1Q8N699 235 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 UBLCP1Q8WVY7 318 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 MAGOHBQ96A72 148 aaKnown RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 PBKQ96KB5 322 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 CTDP1Q9Y5B0 961 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 DOCK1Q14185 1865 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 DICER1Q9UPY3 1922 aaKnown RBP20.3■□□□□ 0.84
PSPC1-201ENST00000338910 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 WNK4Q96J92 1243 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 LSM14BQ9BX40 385 aaKnown RBP20.3■□□□□ 0.84
PSPC1-201ENST00000338910 ADAMTS1Q9UHI8 967 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 SBF1O95248 1867 aa20.3■□□□□ 0.84
PSPC1-201ENST00000338910 ATP2C2O75185 946 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 FAM13AO94988 1023 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 HMGCS2P54868 508 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 ELF3P78545 371 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-201ENST00000338910 TMC3Q7Z5M5 1100 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 CPLX4Q7Z7G2 160 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 NACC1Q96RE7 527 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.29■□□□□ 0.84
PSPC1-201ENST00000338910 TRAF3IP3Q9Y228 551 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 ZBTB48P10074 688 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-201ENST00000338910 NMT1P30419 496 aaKnown RBP20.29■□□□□ 0.84
PSPC1-201ENST00000338910 EPHA7Q15375 998 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-201ENST00000338910 LXNQ9BS40 222 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 IKZF4Q9H2S9 585 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 AS3MTQ9HBK9 375 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 AIPL1Q9NZN9 384 aa20.29■□□□□ 0.84
PSPC1-201ENST00000338910 CEP104O60308 925 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 EIF2AK2P19525 551 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 CLNS1AP54105 237 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 MARSP56192 900 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 ZC3H3Q8IXZ2 948 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 KCTD17Q8N5Z5 321 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 ATG4CQ96DT6 458 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 TAAR1Q96RJ0 339 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 AP1M1Q9BXS5 423 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 A0A1B0GUA9 196 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 PDXKO00764 312 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 CLIC2O15247 247 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RTN2O75298 545 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RPS6P62753 249 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 KLHL30Q0D2K2 578 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 KCNH2Q12809 1159 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RAPGEF1Q13905 1077 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 ZC2HC1CQ53FD0 456 aaPredicted RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 ERMARDQ5T6L9 678 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 B3GNT9Q6UX72 402 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 LRRC57Q8N9N7 239 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RIT2Q99578 217 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 DDX47Q9H0S4 455 aaKnown RBP20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RNF181Q9P0P0 153 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 RPTORQ8N122 1335 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 SSC5DA1L4H1 1573 aa20.28■□□□□ 0.84
PSPC1-201ENST00000338910 PGRMC1O00264 195 aaKnown RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 VWA5AO00534 786 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 ATP6V1G2O95670 118 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 PAX7P23759 505 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 MRPS9P82933 396 aaKnown RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 ARID5AQ03989 594 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 KRT71Q3SY84 523 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 KSR1Q8IVT5 923 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 PROCA1Q8NCQ7 364 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 TLCD1Q96CP7 247 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CHMP6Q96FZ7 201 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CNOT10Q9H9A5 744 aaKnown RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CCT8L1PA6NM43 557 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 F8VZ95 297 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 DAPK3O43293 454 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CALUO43852 315 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 ZBED4O75132 1171 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 TKFCQ3LXA3 575 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 FAM133AQ8N9E0 248 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 SEC14L1Q92503 715 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CENPTQ96BT3 561 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.841e-23■□□□□ 11
PSPC1-201ENST00000338910 GOLPH3Q9H4A6 298 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 NOD2Q9HC29 1040 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 LRRC4CQ9HCJ2 640 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 OLFML3Q9NRN5 406 aa20.27■□□□□ 0.84
PSPC1-201ENST00000338910 ARMCX3Q9UH62 379 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 NOC2LQ9Y3T9 749 aaKnown RBP20.27■□□□□ 0.84
PSPC1-201ENST00000338910 CCDC188H7C350 402 aa20.26■□□□□ 0.83
PSPC1-201ENST00000338910 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
PSPC1-201ENST00000338910 GAP43P17677 238 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms