RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 NT5C2P49902 561 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 SLC30A9Q6PML9 568 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 POTEGQ6S5H5 508 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 POTEEQ6S8J3 1075 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 SEPT12Q8IYM1 358 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 ART4Q93070 314 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 RUNDC3BQ96NL0 473 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 RAB3IPQ96QF0 476 aaPredicted RBP21.9■■□□□ 1.1
RUNX3-202ENST00000338888 TCRBV7S2A1N4TA0A589 114 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 MED24O75448 989 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 RFC4P35249 363 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 RAD23BP54727 409 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 TAOK3Q9H2K8 898 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 DHX36Q9H2U1 1008 aaKnown RBP21.9■■□□□ 1.1
RUNX3-202ENST00000338888 BCAS3Q9H6U6 928 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 LRRC42Q9Y546 428 aa21.9■■□□□ 1.1
RUNX3-202ENST00000338888 AHCYL1O43865 530 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SMIM24O75264 130 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 WFS1O76024 890 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 BRAFP15056 766 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 TNFAIP3P21580 790 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 STX2P32856 288 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 TUBP50607 506 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SLC12A3P55017 1021 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 AMIGO3Q86WK7 504 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 FBF1Q8TES7 1133 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 POP1Q99575 1024 aaKnown RBP21.89■■□□□ 1.09
RUNX3-202ENST00000338888 TSC22D3Q99576 134 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 RNPEPL1Q9HAU8 725 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 USP40Q9NVE5 1235 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 DNAJC12Q9UKB3 198 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SYNGAP1Q96PV0 1343 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SPDYE5A6NIY4 337 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 CTNNA2P26232 953 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SMARCA1P28370 1054 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 GIT2Q14161 759 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 SEPT14Q6ZU15 432 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 NEDD1Q8NHV4 660 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 TMEM237Q96Q45 408 aa21.89■■□□□ 1.09
RUNX3-202ENST00000338888 METTL14Q9HCE5 456 aaKnown RBP21.89■■□□□ 1.09
RUNX3-202ENST00000338888 CHORDC1Q9UHD1 332 aaPredicted RBP21.89■■□□□ 1.09
RUNX3-202ENST00000338888 MEIS1O00470 390 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CALB2P22676 271 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 KCNA1Q09470 495 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CTTNQ14247 550 aaKnown RBP21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CLUL1Q15846 466 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CPSF2Q9P2I0 782 aaKnown RBP21.88■■□□□ 1.09
RUNX3-202ENST00000338888 PDXKO00764 312 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 GNAT1P11488 350 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 PSMC6P62333 389 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 PABPC4Q13310 644 aaKnown RBP eCLIP21.88■■□□□ 1.09
RUNX3-202ENST00000338888 RRP1BQ14684 758 aaKnown RBP21.88■■□□□ 1.09
RUNX3-202ENST00000338888 RNF43Q68DV7 783 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CLEC4GQ6UXB4 293 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 FAM47EQ6ZV65 393 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 SERPINB12Q96P63 405 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 IKZF4Q9H2S9 585 aa21.88■■□□□ 1.09
RUNX3-202ENST00000338888 DNAJC17Q9NVM6 304 aaKnown RBP21.88■■□□□ 1.09
RUNX3-202ENST00000338888 CNTNAP4Q9C0A0 1308 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 MAP3K13O43283 966 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 PEX11AO75192 247 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 ALAS1P13196 640 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 SKIV2L2P42285 1042 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 PAPOLAP51003 745 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 MXRA7P84157 204 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 TNIP1Q15025 636 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 LLGL1Q15334 1064 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 UBL4BQ8N7F7 174 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 PIGOQ8TEQ8 1089 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 MYLK2Q9H1R3 596 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 GPCPD1Q9NPB8 672 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 PAPOLBQ9NRJ5 636 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 CTTNBP2NLQ9P2B4 639 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 LRRD1A4D1F6 860 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 LDHBP07195 334 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 HSPA6P17066 643 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 COILP38432 576 aaPredicted RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 RAB27AP51159 221 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 SF3B3Q15393 1217 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 GRIK5Q16478 980 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 TRMT10CQ7L0Y3 403 aaKnown RBP21.87■■□□□ 1.09
RUNX3-202ENST00000338888 VSIG1Q86XK7 387 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 ANKRD27Q96NW4 1050 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 REEP2Q9BRK0 252 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 STK33Q9BYT3 514 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 TBK1Q9UHD2 729 aa21.87■■□□□ 1.09
RUNX3-202ENST00000338888 ASTN1O14525 1302 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 PITPNM2Q9BZ72 1349 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
RUNX3-202ENST00000338888 KIF13BQ9NQT8 1826 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 ANKRD62A6NC57 917 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 GM2AP17900 193 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 CALCOCO2Q13137 446 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 ARHGAP44Q17R89 818 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 LMNTD2Q8IXW0 634 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 SYT11Q9BT88 431 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 TRPC5Q9UL62 973 aaPredicted RBP21.86■■□□□ 1.09
RUNX3-202ENST00000338888 RSPH10B2B2RC85 870 aa21.86■■□□□ 1.09
RUNX3-202ENST00000338888 H0Y3Z8 333 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms