RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 FRMD4BQ9Y2L6 1034 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 AFF2P51816 1311 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 CYP2J2P51589 502 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 XRCC4Q13426 336 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 SLC29A2Q14542 456 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 MEX3CQ5U5Q3 659 aaKnown RBP21.5■■□□□ 1.03
CDCA4-201ENST00000336219 JAMLQ86YT9 394 aa21.5■■□□□ 1.03
CDCA4-201ENST00000336219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.5■■□□□ 1.031e-9■■■■□ 24.5
CDCA4-201ENST00000336219 TRIM49P0CI25 452 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 TRIM49CP0CI26 452 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 MARCKSL1P49006 195 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 PPP2R5AQ15172 486 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 STXBP4Q6ZWJ1 553 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 CCDC197Q8NCU1 140 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 CTNNBL1Q8WYA6 563 aaPredicted RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 INTS2Q9H0H0 1204 aaKnown RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 CNOT10Q9H9A5 744 aaKnown RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 WRAP73Q9P2S5 460 aaPredicted RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 APEX2Q9UBZ4 518 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 SYNPO2Q9UMS6 1093 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 CCT8L1PA6NM43 557 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 GAS7O60861 476 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 ENTPD3O75355 529 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 ELF1P32519 619 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 IFNAR2P48551 515 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 MKRN4PQ13434 485 aaPredicted RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 ARHGAP44Q17R89 818 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 HIBCHQ6NVY1 386 aaPredicted RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 TEX2Q8IWB9 1127 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 EPS8L3Q8TE67 593 aaKnown RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 TBC1D31Q96DN5 1066 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 PRMT1Q99873 361 aaKnown RBP21.49■■□□□ 1.03
CDCA4-201ENST00000336219 KDM4CQ9H3R0 1056 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 GGT7Q9UJ14 662 aa21.49■■□□□ 1.03
CDCA4-201ENST00000336219 LOXHD1Q8IVV2 1947 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 RPTORQ8N122 1335 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 TMEM110-MUSTN1A8MSY1 372 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 PPIP5K2O43314 1243 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 MUTP22033 750 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 NF2P35240 595 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ECE1P42892 770 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 EIF3BP55884 814 aaKnown RBP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ELF3P78545 371 aaPredicted RBP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 PPP1R7Q15435 360 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ODR4Q5SWX8 454 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 DENND2CQ68D51 928 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 HOOK3Q86VS8 718 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 NEK9Q8TD19 979 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 NACC1Q96RE7 527 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 PABPC3Q9H361 631 aaKnown RBP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 KCND2Q9NZV8 630 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 KIAA0391O15091 583 aaKnown RBP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 LRRN2O75325 713 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 SCP2P22307 547 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 FGFR4P22455 802 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 UBXN2AP68543 259 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 TRAF1Q13077 416 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 CCDC38Q502W7 563 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 KIAA1755Q5JYT7 1200 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ARMC9Q7Z3E5 817 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 FMNL3Q8IVF7 1028 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 KRT35Q92764 455 aa21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ZNF622Q969S3 477 aaKnown RBP eCLIP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ELAC2Q9BQ52 826 aaKnown RBP21.48■■□□□ 1.03
CDCA4-201ENST00000336219 ECM2O94769 699 aaPredicted RBP21.47■■□□□ 1.03
CDCA4-201ENST00000336219 POLR2MP0CAP2 368 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 MYL7Q01449 175 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 FAM133BQ5BKY9 247 aaKnown RBP21.47■■□□□ 1.03
CDCA4-201ENST00000336219 ZDHHC14Q8IZN3 488 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 KIRREL3Q8IZU9 778 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 DIS3Q9Y2L1 958 aaKnown RBP21.47■■□□□ 1.03
CDCA4-201ENST00000336219 DNAJC8O75937 253 aaPredicted RBP21.47■■□□□ 1.03
CDCA4-201ENST00000336219 MMP13P45452 471 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 CEP55Q53EZ4 464 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 CARD9Q9H257 536 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 GRHL1Q9NZI5 618 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 BAIAP2L1Q9UHR4 511 aa21.47■■□□□ 1.03
CDCA4-201ENST00000336219 RGS16O15492 202 aaPredicted RBP21.46■■□□□ 1.03
CDCA4-201ENST00000336219 NUDT17P0C025 328 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 RPL21P46778 160 aaKnown RBP21.46■■□□□ 1.03
CDCA4-201ENST00000336219 BFSP1Q12934 665 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
CDCA4-201ENST00000336219 CCDC113Q9H0I3 377 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 UNC45AQ9H3U1 944 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 TRPC5Q9UL62 973 aaPredicted RBP21.46■■□□□ 1.03
CDCA4-201ENST00000336219 SUFUQ9UMX1 484 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 MGRN1O60291 552 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 VCAM1P19320 739 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 TNFAIP3P21580 790 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 MAPK7Q13164 816 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 ACCSLQ4AC99 568 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 PHLDB3Q6NSJ2 640 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 TTC27Q6P3X3 843 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 SLC9A9Q8IVB4 645 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 SLC20A1Q8WUM9 679 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 CENPTQ96BT3 561 aa21.46■■□□□ 1.03
CDCA4-201ENST00000336219 WDR11Q9BZH6 1224 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms