RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 FOXR2Q6PJQ5 311 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 TMEM40Q8WWA1 233 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 SCLT1Q96NL6 688 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 GBP3Q9H0R5 595 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 BICDL2A1A5D9 508 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 INO80B-WBP1J3KQ70 363 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 PRKCBP05771 671 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 THPOP40225 353 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 AMHR2Q16671 573 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 NECAB2Q7Z6G3 386 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 RSPH3Q86UC2 560 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 SYCP3Q8IZU3 236 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 CELF4Q9BZC1 486 aaKnown RBP23.6■■□□□ 1.37
TPM1-204ENST00000334895 INO80BQ9C086 356 aaPredicted RBP23.6■■□□□ 1.37
TPM1-204ENST00000334895 C11orf49Q9H6J7 331 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 AGPAT3Q9NRZ7 376 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 NFE2L3Q9Y4A8 694 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 CDY2AQ9Y6F7 541 aa23.6■■□□□ 1.37
TPM1-204ENST00000334895 ANKRD63C9JTQ0 380 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 PIGRP01833 764 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 CHRNA1P02708 482 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 CTSHP09668 335 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 DARSP14868 501 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 STRN3Q13033 797 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 GSE1Q14687 1217 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 MAPK6Q16659 721 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 C1orf53Q5VUE5 145 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 ANKRD33Q7Z3H0 272 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 SRGAP1Q7Z6B7 1085 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 GCOM2Q9BZD3 368 aaPredicted RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 FANCLQ9NW38 375 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 EXOC7Q9UPT5 735 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 BECN2A8MW95 431 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 ACKR2O00590 384 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 PQBP1O60828 265 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 RPLP2P05387 115 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 CRYBB1P53674 252 aaPredicted RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 FAM187BQ17R55 369 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 EDRF1Q3B7T1 1238 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 PPP4R3CPQ6ZMV5 832 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 LRRC55Q6ZSA7 311 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 ZC3H3Q8IXZ2 948 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 ZNF710Q8N1W2 664 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 EEF2KMTQ96G04 330 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 TSG101Q99816 390 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 TARS2Q9BW92 718 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 SAMSN1Q9NSI8 373 aaKnown RBP23.59■■□□□ 1.37
TPM1-204ENST00000334895 TRPV2Q9Y5S1 764 aa23.59■■□□□ 1.37
TPM1-204ENST00000334895 SMTNL1A8MU46 457 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 CLIC2O15247 247 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 B4GALT5O43286 388 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 FGFR4P22455 802 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 EIF4BP23588 611 aaKnown RBP23.58■■□□□ 1.36
TPM1-204ENST00000334895 ADSSP30520 456 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 RGS19P49795 217 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 TRIM60Q495X7 471 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 TRAF7Q6Q0C0 670 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 CSGALNACT2Q8N6G5 542 aa23.58■■□□□ 1.36
TPM1-204ENST00000334895 MROH7Q68CQ1 1323 aa23.57■■□□□ 1.36
TPM1-204ENST00000334895 HNRNPDLO14979 420 aaKnown RBP23.57■■□□□ 1.36
TPM1-204ENST00000334895 CALUO43852 315 aaPredicted RBP23.57■■□□□ 1.36
TPM1-204ENST00000334895 HS2ST1Q7LGA3 356 aa23.57■■□□□ 1.36
TPM1-204ENST00000334895 IRF2BP1Q8IU81 584 aa23.57■■□□□ 1.36
TPM1-204ENST00000334895 CBWD1Q9BRT8 395 aa23.57■■□□□ 1.36
TPM1-204ENST00000334895 SRRTQ9BXP5 876 aaKnown RBP23.57■■□□□ 1.36
TPM1-204ENST00000334895 MRPL4Q9BYD3 311 aaKnown RBP23.57■■□□□ 1.36
TPM1-204ENST00000334895 OSBPL7Q9BZF2 842 aa23.57■■□□□ 1.36
TPM1-204ENST00000334895 PRMT7Q9NVM4 692 aaPredicted RBP23.57■■□□□ 1.36
TPM1-204ENST00000334895 NR3C1P04150 777 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 CKBP12277 381 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 ZNF18P17022 549 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 RBL2Q08999 1139 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 NFIL3Q16649 462 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 FAM26DQ5JW98 314 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 ZNF618Q5T7W0 954 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 BICD1Q96G01 975 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 ACO2Q99798 780 aaKnown RBP23.56■■□□□ 1.36
TPM1-204ENST00000334895 HAPLN2Q9GZV7 340 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 CNTNAP2Q9UHC6 1331 aa23.56■■□□□ 1.36
TPM1-204ENST00000334895 TNRC18O15417 2968 aaPredicted RBP23.56■■□□□ 1.36
TPM1-204ENST00000334895 M0QZ92 97 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 TSPAN1O60635 241 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 CAND2O75155 1236 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 LIG4P49917 911 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 TLE2Q04725 743 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 LRRC26Q2I0M4 334 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 HSP90AA4PQ58FG1 418 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 CDKAL1Q5VV42 579 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 ZPBP2Q6X784 338 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 C12orf56Q8IXR9 622 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 GOLGA5Q8TBA6 731 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 ZBTB45Q96K62 511 aaPredicted RBP23.55■■□□□ 1.36
TPM1-204ENST00000334895 PRIMPOLQ96LW4 560 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 TOX2Q96NM4 488 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 DMAC2Q9NW81 257 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 STYXL1Q9Y6J8 313 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 GOLGA6L3A6NEY3 463 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 ABLIM1O14639 778 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 NR2F2P24468 414 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 SNRPFP62306 86 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms