RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CIITAP33076 1130 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 PHKA2P46019 1235 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 MAPK6Q16659 721 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 CCDC127Q96BQ5 260 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 FAM169AQ9Y6X4 670 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 TRIM49BA6NDI0 452 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
HDAC6-201ENST00000334136 LACTBP83111 547 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-201ENST00000334136 NNTQ13423 1086 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-201ENST00000334136 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-201ENST00000334136 TXNRD2Q9NNW7 524 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 FHOD1Q9Y613 1164 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 KRIT1O00522 736 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 SLC16A4O15374 487 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 FTCDO95954 541 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 PEX19P40855 299 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 IFNAR2P48551 515 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 ALCAMQ13740 583 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
HDAC6-201ENST00000334136 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 CLIC2O15247 247 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 SLC26A4O43511 780 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 KRT19P08727 400 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
HDAC6-201ENST00000334136 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SPOPO43791 374 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 HIP1RO75146 1068 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 GNA14O95837 355 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 OATP04181 439 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 NR2F2P24468 414 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 TLK2Q86UE8 772 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 TMEM143Q96AN5 459 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 H3BRB1 525 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 PCK1P35558 622 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 GKAP1Q5VSY0 366 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ANKRD42Q8N9B4 389 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 P2RX5Q93086 422 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 TUT1Q9H6E5 874 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SUCLA2Q9P2R7 463 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SCN9AQ15858 1988 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 RRN3P2A6NIE6 340 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 GPR25O00155 361 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 BCRP11274 1271 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 CYP2C9P11712 490 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ITGB5P18084 799 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 EPHB4P54760 987 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 RNF149Q8NC42 400 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 PCIF1Q9H4Z3 704 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 L2HGDHQ9H9P8 463 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 NID2Q14112 1375 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 MED24O75448 989 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 DLATP10515 647 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ELNP15502 786 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 UBA1P22314 1058 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 FKBP3Q00688 224 aaKnown RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 COASYQ13057 564 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 LLGL1Q15334 1064 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ABRAQ8N0Z2 381 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 SENP7Q9BQF6 1050 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 GCOM2Q9BZD3 368 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-201ENST00000334136 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 PARP2Q9UGN5 583 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 NFU1Q9UMS0 254 aa12.73□□□□□ -0.37
HDAC6-201ENST00000334136 ESYT3A0FGR9 886 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
HDAC6-201ENST00000334136 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-201ENST00000334136 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
HDAC6-201ENST00000334136 OTOP1Q7RTM1 612 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 VSIG1Q86XK7 387 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 COPS5Q92905 334 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms