RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PCIF1Q9H4Z3 704 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 SEL1LQ9UBV2 794 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 TSPAN1O60635 241 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 HOXA11P31270 313 aaPredicted RBP18.14■□□□□ 0.49
SHOX-201ENST00000334060 ZCWPW2Q504Y3 356 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 FBXO47Q5MNV8 452 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 C1orf53Q5VUE5 145 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 MAP4K3Q8IVH8 894 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 CEP120Q8N960 986 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 HIPK3Q9H422 1215 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 FZD8Q9H461 694 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 RNF19AQ9NV58 838 aa18.14■□□□□ 0.49
SHOX-201ENST00000334060 K7ERI5 159 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 ABLIM1O14639 778 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 MGEA5O60502 916 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 ARF4P18085 180 aaPredicted RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 EIF4BP23588 611 aaKnown RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 DHX40Q8IX18 779 aaKnown RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 TRIML1Q8N9V2 468 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 HSD3B7Q9H2F3 369 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 C17orf75Q9HAS0 396 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 DCDC2CA8MYV0 355 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 CLTBP09497 229 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 CCDC192P0DO97 292 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 SMTNP53814 917 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 WNT7BP56706 349 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 PSMD2Q13200 908 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 NCAPHQ15003 741 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 BMT2Q1RMZ1 405 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 TTI2Q6NXR4 508 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 LRRC8DQ7L1W4 858 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 TMEM192Q8IY95 271 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 C7orf61Q8IZ16 206 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 GUF1Q8N442 669 aaKnown RBP18.13■□□□□ 0.49
SHOX-201ENST00000334060 AOPEPQ8N6M6 819 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 ST6GALNAC4Q9H4F1 302 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 ANKFY1Q9P2R3 1169 aa18.13■□□□□ 0.49
SHOX-201ENST00000334060 GOLGA8IPA6NC78 632 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 GOLGA8JA6NMD2 632 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 PHKA2P46019 1235 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 CASP4P49662 377 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
SHOX-201ENST00000334060 NFX1Q12986 1120 aaKnown RBP18.12■□□□□ 0.49
SHOX-201ENST00000334060 PPP2R5AQ15172 486 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 KNOP1Q1ED39 458 aaKnown RBP18.12■□□□□ 0.49
SHOX-201ENST00000334060 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 ZNF410Q86VK4 478 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 EXOC8Q8IYI6 725 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 SAAL1Q96ER3 474 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 TOX2Q96NM4 488 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 EIF2AQ9BY44 585 aaKnown RBP18.12■□□□□ 0.49
SHOX-201ENST00000334060 ST3GAL5Q9UNP4 418 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 HES2Q9Y543 173 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 PHLPP2Q6ZVD8 1323 aa18.12■□□□□ 0.49
SHOX-201ENST00000334060 MEFVO15553 781 aaPredicted RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 ASAP2O43150 1006 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 TFDP1Q14186 410 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 DEFB128Q7Z7B8 93 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 IFNLR1Q8IU57 520 aaPredicted RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 AGPAT3Q9NRZ7 376 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 ANO10Q9NW15 660 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 MEIS3P2A8K0S8 358 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 HNRNPDLO14979 420 aaKnown RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHOX-201ENST00000334060 IQCB1Q15051 598 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 FAM26DQ5JW98 314 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 CENPPQ6IPU0 288 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 CATSPER4Q7RTX7 472 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 ZBTB8OSQ8IWT0 167 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 NME8Q8N427 588 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 LINC01599Q8WXQ3 324 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 P2RX5Q93086 422 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 GCOM2Q9BZD3 368 aaPredicted RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 TSPY26PQ9H489 355 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 PDZD7Q9H5P4 517 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 SAMSN1Q9NSI8 373 aaKnown RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 ZMYND8Q9ULU4 1186 aaPredicted RBP18.11■□□□□ 0.49
SHOX-201ENST00000334060 PADI3Q9ULW8 664 aa18.11■□□□□ 0.49
SHOX-201ENST00000334060 TANC1Q9C0D5 1861 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
SHOX-201ENST00000334060 SELPP16109 830 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 TNFSF9P41273 254 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 ZNF165P49910 485 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 OSTNP61366 133 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 PAK1Q13153 545 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 MAPK6Q16659 721 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 SCARA3Q6AZY7 606 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 SYCP3Q8IZU3 236 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms