RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 ZNF711Q9Y462 761 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 AP3B1O00203 1094 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PHKA1P46020 1223 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 BASP1P80723 227 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 FAM102BQ5T8I3 360 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 NUDCD3Q8IVD9 361 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 DDHD1Q8NEL9 900 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TGFBRAP1Q8WUH2 860 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TTC1Q99614 292 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TIPINQ9BVW5 301 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ZC3H12CQ9C0D7 883 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 DDX39AO00148 427 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 GNGT2O14610 69 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ZNF609O15014 1411 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TRAPPC3O43617 180 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ZBED4O75132 1171 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 KRT7P08729 469 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TRMT5Q32P41 509 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 RCOR2Q8IZ40 523 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 SPDYE1Q8NFV5 336 aaPredicted RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TTLL11Q8NHH1 800 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 RNF34Q969K3 372 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 FAM20AQ96MK3 541 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 MRPL46Q9H2W6 279 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ZNF212Q9UDV6 495 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PTPRUQ92729 1446 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 VIRMAQ69YN4 1812 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 FAM237AA0A1B0GTK4 181 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 DYTNA2CJ06 578 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 KIAA0391O15091 583 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 HNRNPRO43390 633 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 KCNQ3O43525 872 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PDE5AO76074 875 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 LDHAP00338 332 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 RARGP13631 454 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 IL10P22301 178 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 CDC27P30260 824 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 NUP107P57740 925 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 GRIN1Q05586 938 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ANKRD40Q6AI12 368 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 LRRC43Q8N309 656 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PPP1R14BQ96C90 147 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 AGPAT1Q99943 283 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 CNPY3Q9BT09 278 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 NUP85Q9BW27 656 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 COMMD3-BMI1R4GMX3 469 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TOM1O60784 492 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 H2AFYO75367 372 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 HSPA1AP0DMV8 641 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 HSPA1BP0DMV9 641 aaKnown RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PECAM1P16284 738 aaPredicted RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TBXAS1P24557 533 aaPredicted RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 ELF3P78545 371 aaPredicted RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PCNX4Q63HM2 1172 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TTC39CQ8N584 583 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 B4GALNT2Q8NHY0 566 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 TRPC4APQ8TEL6 797 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 RPS6KC1Q96S38 1066 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 POLR3CQ9BUI4 534 aaPredicted RBP7.09□□□□□ -1.27
CPEB4-202ENST00000334035 HESX1Q9UBX0 185 aa7.09□□□□□ -1.27
CPEB4-202ENST00000334035 PJA2O43164 708 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 SKIV2L2P42285 1042 aaKnown RBP7.09□□□□□ -1.28
CPEB4-202ENST00000334035 AP3M2P53677 418 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 PPP2R5DQ14738 602 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 PTPAQ15257 358 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 BRDTQ58F21 947 aaPredicted RBP7.09□□□□□ -1.28
CPEB4-202ENST00000334035 LRRC8BQ6P9F7 803 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 KCTD6Q8NC69 237 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 SDR42E1Q8WUS8 393 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 TRIM9Q9C026 710 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 BARHL2Q9NY43 387 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 KCND2Q9NZV8 630 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 JAG2Q9Y219 1238 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 NUB1Q9Y5A7 615 aa7.09□□□□□ -1.28
CPEB4-202ENST00000334035 GOLGA8MH3BSY2 632 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 GSTA4O15217 222 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 C21orf2O43822 256 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 SHOX2O60902 331 aaPredicted RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 CHEK2O96017 543 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 S100BP04271 92 aaPredicted RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 POLGP54098 1239 aaPredicted RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 STOX1Q6ZVD7 989 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 CDKL3Q8IVW4 592 aaPredicted RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 ATP6V0A1Q93050 837 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 MKNK1Q9BUB5 465 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 PIH1D3Q9NQM4 214 aaKnown RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 E9PMD0 336 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 R3HDM1Q15032 1099 aaKnown RBP7.08□□□□□ -1.28
CPEB4-202ENST00000334035 USH1GQ495M9 461 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 CEP55Q53EZ4 464 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 MAPKAPK5Q8IW41 473 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 PARVBQ9HBI1 364 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 DAB1O75553 588 aa7.08□□□□□ -1.28
CPEB4-202ENST00000334035 KRT75O95678 551 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms