RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ELMSAN1Q6PJG2 1045 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 DEPTORQ8TB45 409 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF184Q99676 751 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 UBE2OQ9C0C9 1292 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 TRAPPC8Q9Y2L5 1435 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 CHD4Q14839 1912 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 FAM47DPA6NHR8 397 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 MSR1P21757 451 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 EXOC3L4Q17RC7 722 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIP13Q15645 432 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 CTNNAL1Q9UBT7 734 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 PIK3R2O00459 728 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 CPA1P15085 419 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 JAK1P23458 1154 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 PLEKHA7Q6IQ23 1121 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 F8VZ95 297 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PI4K2BG5E9Z4 385 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 K7ENM7 598 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RGS20O76081 388 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 C21orf59P57076 290 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 LLGL1Q15334 1064 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 EXOC8Q8IYI6 725 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 DEPDC7Q96QD5 511 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RAPGEF6Q8TEU7 1601 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 ZYXQ15942 572 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TRPC4APQ8TEL6 797 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PAMP19021 973 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 ADCY7P51828 1080 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PSMC6P62333 389 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RBBP7Q16576 425 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RTL3Q8N8U3 475 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 B3GALT6Q96L58 329 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 SPATA4Q8NEY3 305 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 NARS2Q96I59 477 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 JPH4Q96JJ6 628 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 IYDQ6PHW0 289 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 ABCC5O15440 1437 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TJP3O95049 919 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 VSNL1P62760 191 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 GRPEL2Q8TAA5 225 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 DHX38Q92620 1227 aaKnown RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 CFAP69A5D8W1 941 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIM24O15164 1050 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 CACNA2D1P54289 1103 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TRADDQ15628 312 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 FUT8Q9BYC5 575 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PRDM5Q9NQX1 630 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 CDH3P22223 829 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 KRT40Q6A162 431 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 TTC33Q6PID6 262 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PRR23BQ6ZRT6 265 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 PROM2Q8N271 834 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 NSL1Q96IY1 281 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 FAM193BQ96PV7 902 aaPredicted RBP10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 BBS2Q9BXC9 721 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
SPTBN1-201ENST00000333896 BRAFP15056 766 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PTPREP23469 700 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PPARGP37231 505 aaPredicted RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 AOC3Q16853 763 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RUNDC3AQ59EK9 446 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 INPP5DQ92835 1189 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 ATPIF1Q9UII2 106 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PTPRGP23470 1445 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 AXIN1O15169 862 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 CLK1P49759 484 aaKnown RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SNF8Q96H20 258 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 TMEM161AQ9NX61 479 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 RP1P56715 2156 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 H7C0S8 307 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SORBS3O60504 671 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIM13O60858 407 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PLA2G4AP47712 749 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 ANO4Q32M45 955 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SEL1LQ9UBV2 794 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 ARL4CP56559 192 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 PRUNE1Q86TP1 453 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 UNC45BQ8IWX7 931 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 BEST2Q8NFU1 509 aa10.92□□□□□ -0.66
SPTBN1-201ENST00000333896 SELENONQ9NZV5 590 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms