RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CTTNQ14247 550 aaKnown RBP25.44■■□□□ 1.66
TSKU-201ENST00000333090 SLC30A10Q6XR72 485 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 TAOK1Q7L7X3 1001 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 OTUD6AQ7L8S5 288 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 CCDC105Q8IYK2 499 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 RDH13Q8NBN7 331 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 FAM212AQ96EL1 285 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 USP40Q9NVE5 1235 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 FRMD4BQ9Y2L6 1034 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 CFAP73A6NFT4 308 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 ANKRD63C9JTQ0 380 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 SNX3O60493 162 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 FTLP02792 175 aaPredicted RBP25.43■■□□□ 1.66
TSKU-201ENST00000333090 GAP43P17677 238 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 PDE6CP51160 858 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 MYL7Q01449 175 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 NAA25Q14CX7 972 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 PHLDB3Q6NSJ2 640 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 FAM20AQ96MK3 541 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 AGPAT1Q99943 283 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 ZSWIM1Q9BR11 485 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 MIF4GDA9UHW6 222 aaKnown RBP25.43■■□□□ 1.66
TSKU-201ENST00000333090 HSPA6P17066 643 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 KCNJ2P63252 427 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 MESDQ14696 234 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 SLMAPQ14BN4 828 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 HS2ST1Q7LGA3 356 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 VAV3Q9UKW4 847 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 EIF3DO15371 548 aaKnown RBP eCLIP25.43■■□□□ 1.66
TSKU-201ENST00000333090 TAL1P17542 331 aaPredicted RBP25.43■■□□□ 1.66
TSKU-201ENST00000333090 GBP1P32455 592 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 SEL1L2Q5TEA6 688 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 BTNL9Q6UXG8 535 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 PAXIP1Q6ZW49 1069 aaPredicted RBP25.43■■□□□ 1.66
TSKU-201ENST00000333090 PCDHA3Q9Y5H8 950 aa25.43■■□□□ 1.66
TSKU-201ENST00000333090 TCRBV7S2A1N4TA0A589 114 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 RARGP13631 454 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 CTNNA2P26232 953 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 KCNJ1P48048 391 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 MKRN4PQ13434 485 aaPredicted RBP25.42■■□□□ 1.66
TSKU-201ENST00000333090 ZNF746Q6NUN9 644 aaPredicted RBP25.42■■□□□ 1.66
TSKU-201ENST00000333090 EXOC3L1Q86VI1 746 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 NSMCE1Q8WV22 266 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 RSRC1Q96IZ7 334 aaKnown RBP25.42■■□□□ 1.66
TSKU-201ENST00000333090 MKNK1Q9BUB5 465 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 TMEM109Q9BVC6 243 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 FGFR1OP2Q9NVK5 253 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 ZBTB39O15060 712 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 CRYMQ14894 314 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 LONRF1Q17RB8 773 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 CRELD2Q6UXH1 353 aaPredicted RBP25.42■■□□□ 1.66
TSKU-201ENST00000333090 TPH2Q8IWU9 490 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 THOC1Q96FV9 657 aaKnown RBP25.42■■□□□ 1.66
TSKU-201ENST00000333090 TAOK3Q9H2K8 898 aa25.42■■□□□ 1.66
TSKU-201ENST00000333090 UTRNP46939 3433 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 SRCAPQ6ZRS2 3230 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 COMTP21964 271 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 ZNF76P36508 570 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 RIPK1Q13546 671 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 SHROOM1Q2M3G4 852 aaPredicted RBP25.41■■□□□ 1.66
TSKU-201ENST00000333090 C11orf63Q6NUN7 778 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 TBC1D16Q8TBP0 767 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 PARVGQ9HBI0 331 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 HOXA13P31271 388 aaPredicted RBP25.41■■□□□ 1.66
TSKU-201ENST00000333090 SCNN1DP51172 638 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 KIF22Q14807 665 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 FMNL3Q8IVF7 1028 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 POLR3CQ9BUI4 534 aaPredicted RBP25.41■■□□□ 1.66
TSKU-201ENST00000333090 MLXIPLQ9NP71 852 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 HOMER3Q9NSC5 361 aa25.41■■□□□ 1.66
TSKU-201ENST00000333090 USP15Q9Y4E8 981 aaPredicted RBP25.41■■□□□ 1.66
TSKU-201ENST00000333090 TCP11X1B4DZS4 312 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 CHMP2AO43633 222 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 PYGMP11217 842 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 NCALDP61601 193 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 LLGL1Q15334 1064 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 SLFN13Q68D06 897 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 AGPAT3Q9NRZ7 376 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 RARAP10276 462 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 NQO1P15559 274 aaKnown RBP25.4■■□□□ 1.66
TSKU-201ENST00000333090 TNFAIP8L3Q5GJ75 292 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 AGAP11Q8TF27 550 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 HOOK2Q96ED9 719 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 DDX23Q9BUQ8 820 aaKnown RBP25.4■■□□□ 1.66
TSKU-201ENST00000333090 ECT2Q9H8V3 914 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 EBF2Q9HAK2 575 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 STK24Q9Y6E0 443 aa25.4■■□□□ 1.66
TSKU-201ENST00000333090 FAM196BA6NMK8 535 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 ACSL3O95573 720 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 ANP32DO95626 131 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 EEF2P13639 858 aaKnown RBP25.39■■□□□ 1.66
TSKU-201ENST00000333090 CREB1P16220 341 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 SREBF1P36956 1147 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 BANK1Q8NDB2 785 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 AMNQ9BXJ7 453 aa25.39■■□□□ 1.66
TSKU-201ENST00000333090 UBE2TQ9NPD8 197 aaPredicted RBP25.39■■□□□ 1.66
TSKU-201ENST00000333090 ATMINO43313 823 aaPredicted RBP25.39■■□□□ 1.65
TSKU-201ENST00000333090 HLA-DOAP06340 250 aa25.39■■□□□ 1.65
TSKU-201ENST00000333090 PAX7P23759 505 aa25.39■■□□□ 1.65
TSKU-201ENST00000333090 COILP38432 576 aaPredicted RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms