RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MXI1P50539 228 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 SOX10P56693 466 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 SP4Q02446 784 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 PRKG1Q13976 671 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 SNRNP35Q16560 246 aaKnown RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 SLFN11Q7Z7L1 901 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDX28-201ENST00000332395 LMBR1Q8WVP7 490 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 SPIRE2Q8WWL2 714 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 C17orf75Q9HAS0 396 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 HPCAL4Q9UM19 191 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 MYPNQ86TC9 1320 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 TMCO5BA8MYB1 307 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 CNGA1P29973 690 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 GNPTABQ3T906 1256 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 SUPT20HL1Q3ZLR7 823 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 HSP90B2PQ58FF3 399 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 CBWD2Q8IUF1 395 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 CCDC60Q8IWA6 550 aaPredicted RBP18.85■□□□□ 0.61
DDX28-201ENST00000332395 GPC2Q8N158 579 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 NTPCRQ9BSD7 190 aaKnown RBP18.85■□□□□ 0.61
DDX28-201ENST00000332395 TMEM117Q9H0C3 514 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 FEZ2Q9UHY8 353 aaPredicted RBP18.85■□□□□ 0.61
DDX28-201ENST00000332395 WDR90Q96KV7 1748 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 VGLL3A8MV65 326 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 TMEM253P0C7T8 217 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 TNFAIP3P21580 790 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 RNASE9P60153 205 aaKnown RBP18.85■□□□□ 0.61
DDX28-201ENST00000332395 ACTR2P61160 394 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 SYCE1Q8N0S2 351 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 USP38Q8NB14 1042 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 VTI1AQ96AJ9 217 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 PBKQ96KB5 322 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 SEPT9Q9UHD8 586 aaPredicted RBP18.85■□□□□ 0.61
DDX28-201ENST00000332395 NCANO14594 1321 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 PFASO15067 1338 aa18.85■□□□□ 0.61
DDX28-201ENST00000332395 LOC285556D6RIA3 1793 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 SPATA31C2B4DYI2 1134 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 PMM2O15305 246 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 AARSP49588 968 aaKnown RBP eCLIP18.84■□□□□ 0.61
DDX28-201ENST00000332395 GYS2P54840 703 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 MCCD1P59942 119 aaPredicted RBP18.84■□□□□ 0.61
DDX28-201ENST00000332395 PRKCEQ02156 737 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 PTPROQ16827 1216 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 PEX26Q7Z412 305 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 CTNNBL1Q8WYA6 563 aaPredicted RBP18.84■□□□□ 0.61
DDX28-201ENST00000332395 RFFLQ8WZ73 363 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 SAAL1Q96ER3 474 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 MAF1Q9H063 256 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 MED4Q9NPJ6 270 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 SEPT11Q9NVA2 429 aaKnown RBP18.84■□□□□ 0.61
DDX28-201ENST00000332395 LCTP09848 1927 aa18.84■□□□□ 0.61
DDX28-201ENST00000332395 SORBS3O60504 671 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 DGAT1O75907 488 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 TNFRSF8P28908 595 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 SH3D19Q5HYK7 790 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 ABHD15Q6UXT9 468 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 DAAM2Q86T65 1068 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 PALB2Q86YC2 1186 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 MCPH1Q8NEM0 835 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 FAM71BQ8TC56 605 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 VPS18Q9P253 973 aa18.83■□□□□ 0.61
DDX28-201ENST00000332395 ADGRA3Q8IWK6 1321 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.6
DDX28-201ENST00000332395 ZBTB48P10074 688 aaPredicted RBP18.83■□□□□ 0.6
DDX28-201ENST00000332395 ABCB4P21439 1286 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 SLC35G2Q8TBE7 412 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 AGPAT1Q99943 283 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 OSGEPQ9NPF4 335 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 XPNPEP1Q9NQW7 623 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 PDLIM7Q9NR12 457 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 CYP26B1Q9NR63 512 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 TAS2R14Q9NYV8 317 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 SUCLA2Q9P2R7 463 aaPredicted RBP18.83■□□□□ 0.6
DDX28-201ENST00000332395 STXBP5LQ9Y2K9 1186 aa18.83■□□□□ 0.6
DDX28-201ENST00000332395 IGSF9BQ9UPX0 1349 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 USP2O75604 605 aaPredicted RBP18.82■□□□□ 0.6
DDX28-201ENST00000332395 MAP2K1Q02750 393 aaPredicted RBP18.82■□□□□ 0.6
DDX28-201ENST00000332395 SLC39A4Q6P5W5 647 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 ACTRT1Q8TDG2 376 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 SLC20A1Q8WUM9 679 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 CCDC127Q96BQ5 260 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 KRT12Q99456 494 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 TMEM59LQ9UK28 342 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 ADAM21Q9UKJ8 722 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 USP20Q9Y2K6 914 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 FAN1Q9Y2M0 1017 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 CEP104O60308 925 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 GLI1P08151 1106 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 EPHB4P54760 987 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 RTP1P59025 263 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 MIS18BP1Q6P0N0 1132 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 NT5DC3Q86UY8 548 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 METTL13Q8N6R0 699 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 PARD3BQ8TEW8 1205 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 KAT5Q92993 513 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 ATP6V0A4Q9HBG4 840 aa18.82■□□□□ 0.6
DDX28-201ENST00000332395 PSD3Q9NYI0 1048 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms