RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 DIS3Q9Y2L1 958 aaKnown RBP18.45■□□□□ 0.54
DDX41-201ENST00000330503 MACROD2A1Z1Q3 448 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 H0YCG3 227 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 P4HA2O15460 535 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 TXNP10599 105 aaKnown RBP18.44■□□□□ 0.54
DDX41-201ENST00000330503 EPC2Q52LR7 807 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 CST9Q5W186 159 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 PLPPR4Q7Z2D5 763 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 SPATA33Q96N06 139 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 AZI2Q9H6S1 392 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 ADAMTS1Q9UHI8 967 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 SALL4Q9UJQ4 1053 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 BZW2Q9Y6E2 419 aaKnown RBP18.44■□□□□ 0.54
DDX41-201ENST00000330503 ZBTB42B2RXF5 422 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 PMM2O15305 246 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 GARTP22102 1010 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 NAMPTP43490 491 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 DRP2Q13474 957 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 TUBB2AQ13885 445 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 ELF2Q15723 593 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 TAPT1Q6NXT6 567 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 MNS1Q8NEH6 495 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 PARD3BQ8TEW8 1205 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 POMGNT1Q8WZA1 660 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 GLG1Q92896 1179 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
DDX41-201ENST00000330503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX41-201ENST00000330503 TUBB2BQ9BVA1 445 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 TMEM117Q9H0C3 514 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 APEX2Q9UBZ4 518 aa18.44■□□□□ 0.54
DDX41-201ENST00000330503 MARK3P27448 753 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 STAT1P42224 750 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 MKRN4PQ13434 485 aaPredicted RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 TTLL4Q14679 1199 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 DRAP1Q14919 205 aaPredicted RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 MAMDC4Q6UXC1 1216 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 BBXQ8WY36 941 aaPredicted RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 FAM167AQ96KS9 214 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 ENC1O14682 589 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 HNRNPDLO14979 420 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 N4BP1O75113 896 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 TFRCP02786 760 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 ATP1A1P05023 1023 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 ABCD1P33897 745 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 SOX5P35711 763 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 PLCB4Q15147 1175 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 ABRAQ8N0Z2 381 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 TMC2Q8TDI7 906 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 ATP8B4Q8TF62 1192 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 SCFD2Q8WU76 684 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 POP1Q99575 1024 aaKnown RBP18.43■□□□□ 0.54
DDX41-201ENST00000330503 HDAC6Q9UBN7 1215 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 STYXL1Q9Y6J8 313 aa18.43■□□□□ 0.54
DDX41-201ENST00000330503 PLXNB2O15031 1838 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 PLXNA1Q9UIW2 1896 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 LRRIQ3A6PVS8 624 aaPredicted RBP18.42■□□□□ 0.54
DDX41-201ENST00000330503 EFCAB8A8MWE9 144 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 F8VZ95 297 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 STRNO43815 780 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 GFPT2O94808 682 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 MOCS3O95396 460 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 CYP24A1Q07973 514 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 PAPD7Q5XG87 772 aaKnown RBP18.42■□□□□ 0.54
DDX41-201ENST00000330503 ARHGEF19Q8IW93 802 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 OLIG1Q8TAK6 271 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 BICD1Q96G01 975 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 NENFQ9UMX5 172 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
DDX41-201ENST00000330503 LRRIQ4A6NIV6 560 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 EDN1P05305 212 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 FERP16591 822 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 CAPSQ13938 189 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 RSRC2Q7L4I2 434 aaKnown RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 TRAPPC11Q7Z392 1133 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 GPD1LQ8N335 351 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 DEPTORQ8TB45 409 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 PRPF31Q8WWY3 499 aaKnown RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 CCDC127Q96BQ5 260 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 DAAM1Q9Y4D1 1078 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 IGKV6-21A0A0C4DH24 114 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 RBM47A0AV96 593 aaKnown RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 K7ERI5 159 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 EVI5O60447 810 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 PIGRP01833 764 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 SCP2P22307 547 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 SEMA4DQ92854 862 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 ZBTB45Q96K62 511 aaPredicted RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 PACSIN1Q9BY11 444 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 TMEM134Q9H6X4 195 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 TOPORSQ9NS56 1045 aaPredicted RBP18.41■□□□□ 0.54
DDX41-201ENST00000330503 SIP14410 1827 aa18.41■□□□□ 0.54
DDX41-201ENST00000330503 FOXN3O00409 490 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 ITGBL1O95965 494 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms