RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 INPP5FQ9Y2H2 1132 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 ITPR1Q14643 2758 aa16.8■□□□□ 0.28
CTHRC1-201ENST00000330295 AKAP13Q12802 2813 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 DMXL2Q8TDJ6 3036 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 SHISA7A6NL88 538 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF213O14771 459 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 ATG7O95352 703 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 SOD2P04179 222 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 SMC5Q8IY18 1101 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 LPPQ93052 612 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 KXD1Q9BQD3 176 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 ADAMTS10Q9H324 1103 aa16.79■□□□□ 0.28
CTHRC1-201ENST00000330295 NFASCO94856 1347 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 CHURC1-FNTBB4DL54 471 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF806P0C7X5 589 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 PHKA2P46019 1235 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 FNTBP49356 437 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 NOVA1P51513 510 aaKnown RBP16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 LONRF3Q496Y0 759 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 OTUD7AQ8TE49 926 aaPredicted RBP16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 FGF13Q92913 245 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 HEBP1Q9NRV9 189 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 KCNH7Q9NS40 1196 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 NDRG2Q9UN36 371 aaKnown RBP16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 ADAMTS20P59510 1910 aa16.78■□□□□ 0.28
CTHRC1-201ENST00000330295 IGSF10Q6WRI0 2623 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 BACH1O14867 736 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 C1RP00736 705 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 FGFR4P22455 802 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 CLCN3P51790 818 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 FAM160B1Q5W0V3 765 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 PALB2Q86YC2 1186 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 PIBF1Q8WXW3 757 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 LNPKQ9C0E8 428 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 ARRDC1-AS1Q9H2J1 176 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 AKT3Q9Y243 479 aa16.77■□□□□ 0.28
CTHRC1-201ENST00000330295 LOC400499M0QZD8 3231 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 MEIS3P2A8K0S8 358 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 GIPC1O14908 333 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 TGM5O43548 720 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 GAS2O43903 313 aaKnown RBP16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 OFD1O75665 1012 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 DARSP14868 501 aaKnown RBP16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 SATB1Q01826 763 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 GRM4Q14833 912 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 CCDC6Q16204 474 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 CEP68Q76N32 757 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 GRASPQ7Z6J2 395 aaPredicted RBP16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 TRAIPQ9BWF2 469 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 SCNM1Q9BWG6 230 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
CTHRC1-201ENST00000330295 AXIN1O15169 862 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 DDHD2O94830 711 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 IGHDP01880 384 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 ALDH2P05091 517 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 CXCL12P48061 93 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 GLUD2P49448 558 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 PDE1AP54750 535 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 NUCB1Q02818 461 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 TAS1R1Q7RTX1 841 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 LONP2Q86WA8 852 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 ZNF710Q8N1W2 664 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 ZNF668Q96K58 619 aaPredicted RBP16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 TMEM175Q9BSA9 504 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
CTHRC1-201ENST00000330295 SPAG17Q6Q759 2223 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 NRP1O14786 923 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 ZMYND10O75800 440 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 SKIP12755 728 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 ATP4AP20648 1035 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 NTHL1P78549 312 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 ITGB3BPQ13352 177 aaPredicted RBP16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 SEC23AQ15436 765 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 ABHD15Q6UXT9 468 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 TICAM2Q86XR7 235 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 ZNF302Q9NR11 478 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 LAMA5O15230 3695 aa16.74■□□□□ 0.27
CTHRC1-201ENST00000330295 MAN2B1O00754 1011 aa16.73■□□□□ 0.27
CTHRC1-201ENST00000330295 CCNE2O96020 404 aa16.73■□□□□ 0.27
CTHRC1-201ENST00000330295 GPC3P51654 580 aa16.73■□□□□ 0.27
CTHRC1-201ENST00000330295 RNF43Q68DV7 783 aa16.73■□□□□ 0.27
CTHRC1-201ENST00000330295 TWF2Q6IBS0 349 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms