RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 MATN3O15232 486 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC26A4O43511 780 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ATP10AO60312 1499 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ATRNO75882 1429 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 F2P00734 622 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ATP2A2P16615 1042 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 TNFRSF1AP19438 455 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 CD40P25942 277 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 CDSNQ15517 529 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ESRP1Q6NXG1 681 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 BMP8AQ7Z5Y6 402 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 NOP9Q86U38 636 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 DHX37Q8IY37 1157 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 SHCBP1Q8NEM2 672 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 COL22A1Q8NFW1 1626 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 CFHR4Q92496 578 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 GCDHQ92947 438 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 WWC2-AS2Q96NR7 200 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ADOQ96SZ5 270 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 POLR3BQ9NW08 1133 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 USP35Q9P2H5 1018 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 SYNPO2Q9UMS6 1093 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 CTDP1Q9Y5B0 961 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 MYO3AQ8NEV4 1616 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ABCC2Q92887 1545 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 KPNA1P52294 538 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 DSG1Q02413 1049 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 HGFACQ04756 655 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ADCY2Q08462 1091 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ADAM15Q13444 863 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 CREB3L3Q68CJ9 461 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 BCL6BQ8N143 479 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 OR2W6PQ8NHA6 318 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 EDAQ92838 391 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC7A6OSQ96CW6 309 aaPredicted RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 DYDC2Q96IM9 177 aa2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 THG1LQ9NWX6 298 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 USP36Q9P275 1121 aaKnown RBP2.31□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF891A8MT65 544 aaPredicted RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ENPP3O14638 875 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 APOL3O95236 402 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 SCNN1BP51168 640 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 HHEXQ03014 270 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 DUSP8Q13202 625 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MYBPC3Q14896 1274 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 R3HDM1Q15032 1099 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 SPDYAQ5MJ70 313 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 KIAA0907Q7Z7F0 614 aaPredicted RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 NXPE1Q8N323 547 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 TARS2Q9BW92 718 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC6A15Q9H2J7 730 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 FZD8Q9H461 694 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 RICTORQ6R327 1708 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ZC3H13Q5T200 1668 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 STRCP1A6NGW2 1772 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ST20-MTHFSA0A0A6YYL1 179 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 A0A1W2PRX2 142 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ACO1P21399 889 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 RIN1Q13671 783 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 LRRC32Q14392 662 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 KIAA1841Q6NSI8 718 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 SPRED1Q7Z699 444 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ADGRE4PQ86SQ3 457 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 C11orf74Q86VG3 221 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 CHTF18Q8WVB6 975 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 RABGGTAQ92696 567 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 WDR92Q96MX6 357 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 POFUT1Q9H488 388 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ZMAT4Q9H898 229 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 H2AFY2Q9P0M6 372 aaPredicted RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MAGEL2Q9UJ55 1249 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 A0A1W2PPC1 479 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 PRPF6O94906 941 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MSX2P35548 267 aaPredicted RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 IL2P60568 153 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ZXDAP98168 799 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 TCIRG1Q13488 830 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MAN2A1Q16706 1144 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 DALRD3Q5D0E6 543 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 ESPNLQ6ZVH7 1005 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 RTF1Q92541 710 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 FERMT2Q96AC1 680 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MYL10Q9BUA6 226 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 PITHD1Q9GZP4 211 aaPredicted RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 HAPLN2Q9GZV7 340 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MTFR1LQ9H019 292 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 VPS11Q9H270 941 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 MTG2Q9H4K7 406 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 PLA2G3Q9NZ20 509 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 RBM8AQ9Y5S9 174 aaKnown RBP2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 DISP1Q96F81 1524 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 CD109Q6YHK3 1445 aa2.3□□□□□ -2.04
CCDC144A-201ENST00000328495 GOLGA8BA8MQT2 603 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 CYP27B1O15528 508 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 DAPK3O43293 454 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TACR2P21452 398 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 LSSP48449 732 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 BPIFB4P59827 614 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ATP2C1P98194 919 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms