RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 TMEM143Q96AN5 459 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 PDLIM2Q96JY6 352 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 MAP7D2Q96T17 732 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 SUGCTQ9HAC7 445 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 METTL14Q9HCE5 456 aaKnown RBP19.77■□□□□ 0.76
SYNE4-201ENST00000324444 POLD4Q9HCU8 107 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 KAT6AQ92794 2004 aa19.77■□□□□ 0.76
SYNE4-201ENST00000324444 DENND3A2RUS2 1198 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 SLC16A4O15374 487 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 C22orf31O95567 290 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 RPLP2P05387 115 aaKnown RBP19.76■□□□□ 0.75
SYNE4-201ENST00000324444 RAG1P15918 1043 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 KLRC1P26715 233 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 PPP2R3AQ06190 1150 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 KIAA0753Q2KHM9 967 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 SLC9A9Q8IVB4 645 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 MAP4K3Q8IVH8 894 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 C12orf56Q8IXR9 622 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 ZC3H3Q8IXZ2 948 aaKnown RBP19.76■□□□□ 0.75
SYNE4-201ENST00000324444 FGFBP2Q9BYJ0 223 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 IFNKQ9P0W0 207 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 ARHGAP28Q9P2N2 729 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 SUCLA2Q9P2R7 463 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-201ENST00000324444 TBX20Q9UMR3 447 aa19.76■□□□□ 0.75
SYNE4-201ENST00000324444 LRRIQ4A6NIV6 560 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 K7ERI5 159 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 ARVCFO00192 962 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 KIAA0391O15091 583 aaKnown RBP19.75■□□□□ 0.75
SYNE4-201ENST00000324444 SLC16A3O15427 465 aaKnown RBP19.75■□□□□ 0.75
SYNE4-201ENST00000324444 ATP1A3P13637 1013 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 GLRA2P23416 452 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 NR2F2P24468 414 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 CDK7P50613 346 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 ZC2HC1CQ53FD0 456 aaPredicted RBP19.75■□□□□ 0.75
SYNE4-201ENST00000324444 MTHFD1LQ6UB35 978 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 METTL13Q8N6R0 699 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 PRPF31Q8WWY3 499 aaKnown RBP19.75■□□□□ 0.75
SYNE4-201ENST00000324444 MKNK1Q9BUB5 465 aa19.75■□□□□ 0.75
SYNE4-201ENST00000324444 HOXC8P31273 242 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 MTIF2P46199 727 aaKnown RBP19.74■□□□□ 0.75
SYNE4-201ENST00000324444 MARSP56192 900 aaKnown RBP19.74■□□□□ 0.75
SYNE4-201ENST00000324444 IGBP1P78318 339 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 SHHQ15465 462 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 C9orf50Q5SZB4 431 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 GPR153Q6NV75 609 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 C7orf31Q8N865 590 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 CNOT6LQ96LI5 555 aaKnown RBP19.74■□□□□ 0.75
SYNE4-201ENST00000324444 SEZ6LQ9BYH1 1024 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 NFKBIZQ9BYH8 718 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 FRMD4BQ9Y2L6 1034 aa19.74■□□□□ 0.75
SYNE4-201ENST00000324444 NR3C1P04150 777 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 SMIM10L2AP0DMW4 78 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 SMIM10L2BP0DMW5 78 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 EPB41P11171 864 aaKnown RBP19.73■□□□□ 0.75
SYNE4-201ENST00000324444 HOXD13P35453 343 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 LAMTOR4Q0VGL1 99 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 KRT31Q15323 416 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 CCDC40Q4G0X9 1142 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 SLFN12LQ6IEE8 588 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 LRRC55Q6ZSA7 311 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 FRMD5Q7Z6J6 570 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 CREBRFQ8IUR6 639 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 BSNDQ8WZ55 320 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 XPO4Q9C0E2 1151 aaKnown RBP19.73■□□□□ 0.75
SYNE4-201ENST00000324444 AGPAT3Q9NRZ7 376 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 IMPACTQ9P2X3 320 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 TBX21Q9UL17 535 aa19.73■□□□□ 0.75
SYNE4-201ENST00000324444 A0A1B0GTH6 734 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 SMIM35A0A1B0GVV1 85 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 C17orf102A2RUQ5 167 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 N4BP3O15049 544 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 TLR3O15455 904 aaKnown RBP19.72■□□□□ 0.75
SYNE4-201ENST00000324444 TGFB1I1O43294 461 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 PSMC2P35998 433 aaKnown RBP19.72■□□□□ 0.75
SYNE4-201ENST00000324444 PHKA2P46019 1235 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 COPB1P53618 953 aaKnown RBP19.72■□□□□ 0.75
SYNE4-201ENST00000324444 CAPSQ13938 189 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 NFRKBQ6P4R8 1299 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 RHPN2Q8IUC4 686 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 ASAP3Q8TDY4 903 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 TUBGCP2Q9BSJ2 902 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 EVPLQ92817 2033 aa19.72■□□□□ 0.75
SYNE4-201ENST00000324444 TRIP12Q14669 1992 aaPredicted RBP19.72■□□□□ 0.75
SYNE4-201ENST00000324444 MAPK13O15264 365 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 AP5Z1O43299 807 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 ADAM17P78536 824 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 FPGSQ05932 587 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 ITGA7Q13683 1181 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 MAPK6Q16659 721 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 MAN2A1Q16706 1144 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 HSP90AA4PQ58FG1 418 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 FKBP15Q5T1M5 1219 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 CDCA2Q69YH5 1023 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-201ENST00000324444 Q7L0L9 218 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 USP37Q86T82 979 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 ZNF410Q86VK4 478 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 IRF2BP1Q8IU81 584 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 FAM126BQ8IXS8 530 aa19.71■□□□□ 0.75
SYNE4-201ENST00000324444 NME8Q8N427 588 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms