RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PCDHB6Q9Y5E3 794 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 ERBB4Q15303 1308 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 ALDH18A1P54886 795 aaKnown RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 ZNF699Q32M78 642 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 HORMAD1Q86X24 394 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 K7ERI5 159 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 BLVRAP53004 296 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 RAB14P61106 215 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 TAP1Q03518 808 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 ZNF556Q9HAH1 456 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 PDIA2Q13087 525 aaKnown RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 LRFN2Q9ULH4 789 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 HMGB3O15347 200 aaKnown RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 SEC24DO94855 1032 aaPredicted RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 NR3C1P04150 777 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 KRR1Q13601 381 aaKnown RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 RRM2BQ7LG56 351 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 DPP9Q86TI2 863 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 PPM1NQ8N819 430 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 TMEM245Q9H330 911 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 PPCSQ9HAB8 311 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 UBE4BO95155 1302 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 TCP10L2B9ZVM9 353 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 FASTKD1Q53R41 847 aaKnown RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 ADCY3O60266 1144 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 MRPS25P82663 173 aaKnown RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 SEMA3FQ13275 785 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 TRIM72Q6ZMU5 477 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 CMTM5Q96DZ9 223 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 TTC7AQ9ULT0 858 aaPredicted RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 ARIH2O95376 493 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 LIFRP42702 1097 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 MRPS35P82673 323 aaKnown RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 EIF3HO15372 352 aaKnown RBP eCLIP17.87■□□□□ 0.452e-6■■□□□ 14.4
SMCHD1-201ENST00000320876 DDX17Q92841 729 aaKnown RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 CCDC134Q9H6E4 229 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 ENO1P06733 434 aaKnown RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 AASDHQ4L235 1098 aaPredicted RBP17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 STMN3Q9NZ72 180 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
SMCHD1-201ENST00000320876 KDSRQ06136 332 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 RABGAP1LQ5R372 815 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 LUZP2Q86TE4 346 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 DNAJC12Q9UKB3 198 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 CD2BP2O95400 341 aaKnown RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 STAT4Q14765 748 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 LRRC31Q6UY01 552 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 ARL8AQ96BM9 186 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 TRIM54Q9BYV2 358 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 ADORA1P30542 326 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 ADD2P35612 726 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 TEKT4Q8WW24 435 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 SELENONQ9NZV5 590 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 VCPP55072 806 aaKnown RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 CAB39Q9Y376 341 aaPredicted RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 USP15Q9Y4E8 981 aaPredicted RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 PITPNM2Q9BZ72 1349 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 AGTP01019 485 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 TMEM35BQ8NCS4 154 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 TSSK1BQ9BXA7 367 aa17.86■□□□□ 0.45
SMCHD1-201ENST00000320876 HSPA13P48723 471 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 CCDC142Q17RM4 750 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 IL17RAQ96F46 866 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 SLC9A2Q9UBY0 812 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 CDC27P30260 824 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 RFX8Q6ZV50 586 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 OTULINQ96BN8 352 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 MYH8P13535 1937 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 MDH1P40925 334 aaKnown RBP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 HEMGNQ9BXL5 484 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 LRRC24Q50LG9 513 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 TMEM270Q6UE05 265 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 NSMCE4AQ9NXX6 385 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 PCDHGB4Q9UN71 923 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 EIF4E1BA6NMX2 242 aaKnown RBP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 ORC2Q13416 577 aaPredicted RBP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 TERB1Q8NA31 727 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 CEP95Q96GE4 821 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 UBAP1LF5GYI3 381 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 AP3B1O00203 1094 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 NBNO60934 754 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 PHKA1P46020 1223 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 BYSLQ13895 437 aaKnown RBP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 PASD1Q8IV76 773 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 EGFL8Q99944 293 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 STK36Q9NRP7 1315 aa17.85■□□□□ 0.45
SMCHD1-201ENST00000320876 AKAP10O43572 662 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms