RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 EZRP15311 586 aaKnown RBP16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 GAP43P17677 238 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 ZNF844Q08AG5 666 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 HLTFQ14527 1009 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 UGCGQ16739 394 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 DAW1Q8N136 415 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 C1orf131Q8NDD1 294 aaKnown RBP16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 CBWD1Q9BRT8 395 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 OLFML3Q9NRN5 406 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 NAGPAQ9UK23 515 aa16.81■□□□□ 0.28
SHROOM1-201ENST00000319854 PEX10O60683 326 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 ICAM1P05362 532 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 MYZAPP0CAP1 466 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 GCLMP48507 274 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 XRCC4Q13426 336 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 NAA25Q14CX7 972 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 PLCB1Q9NQ66 1216 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 DNAJC12Q9UKB3 198 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 CCDC169A6NNP5 214 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 SLC16A4O15374 487 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 MGRN1O60291 552 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 CEP104O60308 925 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 EVI5O60447 810 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 CCNHP51946 323 aaPredicted RBP16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 PEX3P56589 373 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 DRAP1Q14919 205 aaPredicted RBP16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 FAM102BQ5T8I3 360 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 CCT6BQ92526 530 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 RMDN3Q96TC7 470 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 METTL14Q9HCE5 456 aaKnown RBP16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 SIX2Q9NPC8 291 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 RGS17Q9UGC6 210 aaPredicted RBP16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
SHROOM1-201ENST00000319854 FMO5P49326 533 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 TRAF1Q13077 416 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 MAGEC3Q8TD91 643 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 RPAP3Q9H6T3 665 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ACP6Q9NPH0 428 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 PTGER2P43116 358 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ELF3P78545 371 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 DLK2Q6UY11 383 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 MDM1Q8TC05 714 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 TAF4BQ92750 862 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 INPP4AQ96PE3 977 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ATP6V0A4Q9HBG4 840 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 OSGEPQ9NPF4 335 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 CLSTN1O94985 981 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 VCAM1P19320 739 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 ZNF746Q6NUN9 644 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 SYTL5Q8TDW5 730 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 SYN2Q92777 582 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 STAMBPL1Q96FJ0 436 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 BAIAP2L1Q9UHR4 511 aa16.79■□□□□ 0.28
SHROOM1-201ENST00000319854 CENPFP49454 3210 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 TNIP1Q15025 636 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 LACTB2Q53H82 288 aaPredicted RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 DPY19L2P1Q6NXN4 242 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 DAAM2Q86T65 1068 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 PALB2Q86YC2 1186 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 TATDN2Q93075 761 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 DEFB129Q9H1M3 183 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 TAF1DQ9H5J8 278 aaPredicted RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 FRMPD4Q14CM0 1322 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 C5orf60A6NFR6 353 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 GOLGA6L10A6NI86 522 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 DDX3XO00571 662 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 ATP6V1G2O95670 118 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 STAT1P42224 750 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 LLGL1Q15334 1064 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 RPS6KA1Q15418 735 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 XKR9Q5GH70 373 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 SAAL1Q96ER3 474 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 THOC1Q96FV9 657 aaKnown RBP16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 NOD2Q9HC29 1040 aa16.78■□□□□ 0.28
SHROOM1-201ENST00000319854 RBAK-RBAKDNI3L0D1 243 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 CDC25CP30307 473 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms