RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HVCN1Q96D96 273 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 LRRC4CQ9HCJ2 640 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 KCNH7Q9NS40 1196 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 WRAP73Q9P2S5 460 aaPredicted RBP18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 IPO5O00410 1097 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 KRIT1O00522 736 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 DSG3P32926 999 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 COASYQ13057 564 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 CATSPERGQ6ZRH7 1159 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 MXRA8Q9BRK3 442 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 UNC45AQ9H3U1 944 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 DOCK1Q14185 1865 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 SLITRK3O94933 977 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 KRT18P05783 430 aaKnown RBP18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 ITGA4P13612 1032 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 XRCC4Q13426 336 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 LACTB2Q53H82 288 aaPredicted RBP18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 ARMC9Q7Z3E5 817 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 MCF2L2Q86YR7 1114 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 METTL13Q8N6R0 699 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 REPS2Q8NFH8 660 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 ERMNQ8TAM6 284 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 MDM1Q8TC05 714 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 SLC5A5Q92911 643 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 OTUD5Q96G74 571 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 DNM3Q9UQ16 869 aa18.58■□□□□ 0.57
SCAMP4-201ENST00000316097 SFI1A8K8P3 1242 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 C19orf81C9J6K1 198 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 PTK2Q05397 1052 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 PSMD2Q13200 908 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 TMC3Q7Z5M5 1100 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 CCT6BQ92526 530 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 RMDN3Q96TC7 470 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.58■□□□□ 0.561e-8■□□□□ 8.6
SCAMP4-201ENST00000316097 DPH5Q9H2P9 285 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 PCNTO95613 3336 aa18.58■□□□□ 0.56
SCAMP4-201ENST00000316097 IRF6O14896 467 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 DRD4P21917 467 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 EPHX2P34913 555 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 DHX9Q08211 1270 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 SF3A3Q12874 501 aaKnown RBP eCLIP18.57■□□□□ 0.562e-7■■□□□ 14.5
SCAMP4-201ENST00000316097 CALR3Q96L12 384 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 HSD17B14Q9BPX1 270 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 RSPH10B2B2RC85 870 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 TTI1O43156 1089 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 PPP1R12BO60237 982 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 RSPH10BP0C881 870 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 IFFO1Q0D2I5 559 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 SH2D3AQ9BRG2 576 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 CELF4Q9BZC1 486 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 EHMT1Q9H9B1 1298 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 PITPNM2Q9BZ72 1349 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 BHMG1C9JSJ3 638 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 PGM5Q15124 567 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 FAM26FQ5R3K3 315 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 TRIM59Q8IWR1 403 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 MAGEC3Q8TD91 643 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 GANQ9H2C0 597 aa18.57■□□□□ 0.56
SCAMP4-201ENST00000316097 SPDYE16A6NNV3 312 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 F8VZ95 297 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 SORBS3O60504 671 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 ATP9AO75110 1047 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 ACTN1P12814 892 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 TKFCQ3LXA3 575 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 NOL9Q5SY16 702 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 ZNF571Q7Z3V5 609 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 LRRC57Q8N9N7 239 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 C12orf42Q96LP6 360 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 RUSC1Q9BVN2 902 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 BMP2KQ9NSY1 1161 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 CSADQ9Y600 493 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 TESPA1A2RU30 521 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 SLC8A1P32418 973 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 ARHGEF16Q5VV41 709 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 CHMP6Q96FZ7 201 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 REEP2Q9BRK0 252 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 TRIM31Q9BZY9 425 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 KDM4CQ9H3R0 1056 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 R3HDMLQ9H3Y0 253 aa18.56■□□□□ 0.56
SCAMP4-201ENST00000316097 BTNL10A8MVZ5 291 aa18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 CCDC188H7C350 402 aa18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 DNAJC8O75937 253 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 CASP5P51878 434 aa18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 CLNS1AP54105 237 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 GIT2Q14161 759 aa18.55■□□□□ 0.56
SCAMP4-201ENST00000316097 IFI16Q16666 785 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms