RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 TDRD7Q8NHU6 1098 aaKnown RBP9.51□□□□□ -0.89
C2CD3-201ENST00000313663 SH3KBP1Q96B97 665 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 KLHL29Q96CT2 875 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 IFT43Q96FT9 208 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 CENPKQ9BS16 269 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 TRIM45Q9H8W5 580 aaPredicted RBP9.51□□□□□ -0.89
C2CD3-201ENST00000313663 GINM1Q9NU53 330 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 THEGQ9P2T0 379 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 SUFUQ9UMX1 484 aa9.51□□□□□ -0.89
C2CD3-201ENST00000313663 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
C2CD3-201ENST00000313663 LRP5O75197 1615 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 SNX2O60749 519 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 FTCDO95954 541 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 CALB1P05937 261 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 ARHGDIAP52565 204 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 FBXW4P57775 412 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 RBL2Q08999 1139 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 RBM46Q8TBY0 533 aaKnown RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 FMO2Q99518 471 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 SERPINI1Q99574 410 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 THAP9Q9H5L6 903 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 CNOT8Q9UFF9 292 aaKnown RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 ABCB11O95342 1321 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 P4HBP07237 508 aaKnown RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 SMAP1Q8IYB5 467 aaPredicted RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 ZNF560Q96MR9 790 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 TMEM47Q9BQJ4 181 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 TUBB6Q9BUF5 446 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 MAN1B1Q9UKM7 699 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 COL5A3P25940 1745 aaPredicted RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 NFIXQ14938 502 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 TRIM68Q6AZZ1 485 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 AMIGO3Q86WK7 504 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 AFG1LQ8WV93 481 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 LCMT1Q9UIC8 334 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 ANAPC7Q9UJX3 599 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 SNAP25P60880 206 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 CYP27A1Q02318 531 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 THEMIS2Q5TEJ8 643 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 PRDM5Q9NQX1 630 aaPredicted RBP9.5□□□□□ -0.89
C2CD3-201ENST00000313663 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 BTAF1O14981 1849 aa9.5□□□□□ -0.89
C2CD3-201ENST00000313663 HNRNPCL2B2RXH8 293 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 ECE2O60344 883 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 HNRNPCL1O60812 293 aaKnown RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PRELPP51888 382 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PPP4R4Q6NUP7 873 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 ZWILCHQ9H900 591 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 CFLARO15519 480 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 MOCS3O95396 460 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PYGLP06737 847 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 EIF3BP55884 814 aaKnown RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 ARL4CP56559 192 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PRAMEP78395 509 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 UNC13DQ70J99 1090 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TEX12Q9BXU0 123 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 SLC7A5P2Q9GIP4 190 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 ZNF302Q9NR11 478 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TBK1Q9UHD2 729 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 EEF1B2P24534 225 aaKnown RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TBXAS1P24557 533 aaPredicted RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 MXD4Q14582 209 aaPredicted RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 KCNV1Q6PIU1 500 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 USP17L6PQ6QN14 398 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TMEM270Q6UE05 265 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 GPT2Q8TD30 523 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 SPATA17Q96L03 361 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
C2CD3-201ENST00000313663 SH3GLB2Q9NR46 395 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 HSPA4LO95757 839 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 DEPDC1BQ8WUY9 529 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 FAF2Q96CS3 445 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 DNAJC12Q9UKB3 198 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 GDAQ9Y2T3 454 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 PCDHB6Q9Y5E3 794 aa9.49□□□□□ -0.89
C2CD3-201ENST00000313663 CYBBP04839 570 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms