RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CBX2Q14781 532 aaPredicted RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 EPHA7Q15375 998 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 PLA2G4FQ68DD2 849 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 TWF2Q6IBS0 349 aaKnown RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 ANKRD54Q6NXT1 300 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 PIK3AP1Q6ZUJ8 805 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 CATSPER4Q7RTX7 472 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 KSR1Q8IVT5 923 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 C4orf19Q8IY42 314 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 SLFN12Q8IYM2 578 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 SLC39A11Q8N1S5 342 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 PRPF31Q8WWY3 499 aaKnown RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 SUSD6Q92537 303 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 HAS1Q92839 578 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 PGBD4Q96DM1 585 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 NLRP4Q96MN2 994 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 S1PR5Q9H228 398 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 IFT122Q9HBG6 1241 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 GJB4Q9NTQ9 266 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 ORC3Q9UBD5 711 aaPredicted RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 PIN4Q9Y237 131 aaKnown RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 ZNF292O60281 2723 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 FRYLO94915 3013 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 KMT2EQ8IZD2 1858 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 DMXL1Q9Y485 3027 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 C2orf71A6NGG8 1288 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 ASAP2O43150 1006 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
TPM3-203ENST00000312970 SRGAP2CP0DJJ0 459 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 YWHABP31946 246 aaKnown RBP9.1□□□□□ -0.95
TPM3-203ENST00000312970 RAB27AP51159 221 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 POLGP54098 1239 aaPredicted RBP9.1□□□□□ -0.95
TPM3-203ENST00000312970 AK2P54819 239 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 TCF15Q12870 199 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 LONRF3Q496Y0 759 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 NOMO2Q5JPE7 1267 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 LLGL2Q6P1M3 1020 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 SYCE2Q6PIF2 218 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 GLB1LQ6UWU2 654 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 TMEM87AQ8NBN3 555 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 TCP11Q8WWU5 503 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 PSPC1Q8WXF1 523 aaKnown RBP9.1□□□□□ -0.95
TPM3-203ENST00000312970 CASP10Q92851 521 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 LPPQ93052 612 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 TMEM169Q96HH4 297 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 RPGRIP1Q96KN7 1286 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 DHX33Q9H6R0 707 aaKnown RBP9.1□□□□□ -0.95
TPM3-203ENST00000312970 ZSWIM4Q9H7M6 989 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 BRMS1Q9HCU9 246 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 FAM105AQ9NUU6 356 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 COL4A3BPQ9Y5P4 624 aa9.1□□□□□ -0.95
TPM3-203ENST00000312970 ZBTB39O15060 712 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 EIF5BO60841 1220 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 DTNBO60941 627 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 CLASP2O75122 1294 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 ZC3H11AO75152 810 aaKnown RBP eCLIP9.09□□□□□ -0.95
TPM3-203ENST00000312970 OFD1O75665 1012 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 SLITRK3O94933 977 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 ALDH2P05091 517 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 GALTP07902 379 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 FDPSP14324 419 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 CA8P35219 290 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 KRT2P35908 639 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 ZXDAP98168 799 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 RNASELQ05823 741 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 LAMTOR4Q0VGL1 99 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 NR5A1Q13285 461 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 GIT2Q14161 759 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 XKR9Q5GH70 373 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 EARS2Q5JPH6 523 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 NCAPH2Q6IBW4 605 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 CES5AQ6NT32 575 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 TRIM67Q6ZTA4 783 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 BMP8AQ7Z5Y6 402 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 MRPL10Q7Z7H8 261 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 DDX53Q86TM3 631 aaKnown RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 VPS52Q8N1B4 723 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 DYDC2Q96IM9 177 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 LXNQ9BS40 222 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 NRDE2Q9H7Z3 1164 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 AGPAT5Q9NUQ2 364 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 TBC1D13Q9NVG8 400 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 RGL1Q9NZL6 768 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 KANSL3Q9P2N6 904 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 WRAP73Q9P2S5 460 aaPredicted RBP9.09□□□□□ -0.95
TPM3-203ENST00000312970 PCDHA12Q9UN75 941 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 PCDHB2Q9Y5E7 798 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 IRAK3Q9Y616 596 aa9.09□□□□□ -0.95
TPM3-203ENST00000312970 TMEM221A6NGB7 291 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 MEIS3P2A8K0S8 358 aa9.08□□□□□ -0.96
TPM3-203ENST00000312970 M0R296 226 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms