RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 IRX2Q9BZI1 471 aaPredicted RBP16.34■□□□□ 0.21
KDM3A-201ENST00000312912 ZNF609O15014 1411 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 PTPRMP28827 1452 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 FCER1AP12319 257 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
KDM3A-201ENST00000312912 NR1I3Q14994 352 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 MAPK6Q16659 721 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 KRT80Q6KB66 452 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 FAM47EQ6ZV65 393 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 STAG2Q8N3U4 1231 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 CHP1Q99653 195 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
KDM3A-201ENST00000312912 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 GYG2O15488 501 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 CAND2O75155 1236 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 NCF2P19878 526 aaPredicted RBP16.34■□□□□ 0.21
KDM3A-201ENST00000312912 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 TRIM59Q8IWR1 403 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 TTC17Q96AE7 1141 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 C11orf70Q9BRQ4 267 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 AP5M1Q9H0R1 490 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 CPSF3Q9UKF6 684 aaKnown RBP16.34■□□□□ 0.21
KDM3A-201ENST00000312912 ANGPTL3Q9Y5C1 460 aa16.34■□□□□ 0.21
KDM3A-201ENST00000312912 GLI2P10070 1586 aa16.33■□□□□ 0.21
KDM3A-201ENST00000312912 ZNF211Q13398 564 aaPredicted RBP16.33■□□□□ 0.21
KDM3A-201ENST00000312912 ARL13BQ3SXY8 428 aa16.33■□□□□ 0.21
KDM3A-201ENST00000312912 TRIM72Q6ZMU5 477 aa16.33■□□□□ 0.21
KDM3A-201ENST00000312912 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.21
KDM3A-201ENST00000312912 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.21
KDM3A-201ENST00000312912 PPARGC1AQ9UBK2 798 aaKnown RBP16.33■□□□□ 0.21
KDM3A-201ENST00000312912 FEM1BQ9UK73 627 aa16.33■□□□□ 0.21
KDM3A-201ENST00000312912 RHOBTB3O94955 611 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 ATICP31939 592 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■□□ 17.4
KDM3A-201ENST00000312912 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.2
KDM3A-201ENST00000312912 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 ASNSD1Q9NWL6 643 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
KDM3A-201ENST00000312912 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 ABCB11O95342 1321 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 A0A0G2JND7 137 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 KDM1AO60341 852 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 LPXNO60711 386 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 TMEM270Q6UE05 265 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 CHMP6Q96FZ7 201 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 NLRP4Q96MN2 994 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 NUP85Q9BW27 656 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 PPP1R37O75864 691 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 CCND1P24385 295 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 DPYDQ12882 1025 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 TTC1Q99614 292 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 SLC40A1Q9NP59 571 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 RHBDL2Q9NX52 303 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
KDM3A-201ENST00000312912 COL15A1P39059 1388 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 SLC16A4O15374 487 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 ZNF18P17022 549 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 SOX5P35711 763 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 CACNB3P54284 484 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 SLC18A3Q16572 532 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 RHOT1Q8IXI2 618 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 HIC2Q96JB3 615 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 SPAG7O75391 227 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 KRT7P08729 469 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 EEPD1Q7L9B9 569 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 B4GALNT2Q8NHY0 566 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 EPN3Q9H201 632 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 MRPL46Q9H2W6 279 aaKnown RBP16.32■□□□□ 0.2
KDM3A-201ENST00000312912 ANLNQ9NQW6 1124 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 FXR1P51114 621 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■■□ 23.3
KDM3A-201ENST00000312912 CYLC2Q14093 348 aaPredicted RBP16.32■□□□□ 0.2
KDM3A-201ENST00000312912 ZNF394Q53GI3 561 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 CCDC137Q6PK04 289 aaKnown RBP16.32■□□□□ 0.2
KDM3A-201ENST00000312912 GRAMD1AQ96CP6 724 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 LRRC37BQ96QE4 947 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 UTP6Q9NYH9 597 aaKnown RBP16.32■□□□□ 0.2
KDM3A-201ENST00000312912 FBXL5Q9UKA1 691 aa16.32■□□□□ 0.2
KDM3A-201ENST00000312912 EYA4O95677 639 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 MYBL1P10243 752 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TPP2P29144 1249 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 PLA2G4AP47712 749 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 PAPOLAP51003 745 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 MDM2Q00987 491 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TMEM154Q6P9G4 183 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TC2NQ8N9U0 490 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 NSUN6Q8TEA1 469 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms