RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ADSSL1Q8N142 457 aa24.63■■□□□ 1.53
CCDC85B-201ENST00000312579 ZNF507Q8TCN5 953 aa24.63■■□□□ 1.53
CCDC85B-201ENST00000312579 FZD8Q9H461 694 aa24.63■■□□□ 1.53
CCDC85B-201ENST00000312579 AGO3Q9H9G7 860 aaKnown RBP24.63■■□□□ 1.53
CCDC85B-201ENST00000312579 PHLPP2Q6ZVD8 1323 aa24.63■■□□□ 1.53
CCDC85B-201ENST00000312579 TISP43B9A030 160 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 PITPNM1O00562 1244 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 EIF3DO15371 548 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 LPIN1Q14693 890 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 GPNMBQ14956 572 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 MAPK6Q16659 721 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 AMHR2Q16671 573 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 FBXO47Q5MNV8 452 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 FAM228AQ86W67 206 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 C7orf61Q8IZ16 206 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 SLC17A8Q8NDX2 589 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 FAM200AQ8TCP9 573 aa24.62■■□□□ 1.53
CCDC85B-201ENST00000312579 ZMYM2Q9UBW7 1377 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 H0YCG3 227 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 BMT2Q1RMZ1 405 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 CPB2Q96IY4 423 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 ACCSQ96QU6 501 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 TARS2Q9BW92 718 aaKnown RBP24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 CD52P31358 61 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 STRN3Q13033 797 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 ALCAMQ13740 583 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 STXBP4Q6ZWJ1 553 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 CATSPER4Q7RTX7 472 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 CDR2LQ86X02 465 aaPredicted RBP24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 MAP4K3Q8IVH8 894 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 ZNF710Q8N1W2 664 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 GUF1Q8N442 669 aaKnown RBP24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 CTNND2Q9UQB3 1225 aa24.61■■□□□ 1.53
CCDC85B-201ENST00000312579 TSPAN1O60635 241 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 NBNO60934 754 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 RPS6KA5O75582 802 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 PMS1P54277 932 aaKnown RBP24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 STX17P56962 302 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 SLC39A4Q6P5W5 647 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 SYCP3Q8IZU3 236 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 MLKLQ8NB16 471 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 BICD1Q96G01 975 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 KCTD10Q9H3F6 313 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 SEMA6BQ9H3T3 888 aa24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 PRMT7Q9NVM4 692 aaPredicted RBP24.6■■□□□ 1.53
CCDC85B-201ENST00000312579 ANKRD63C9JTQ0 380 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 ACKR2O00590 384 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 KIAA0355O15063 1070 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 TGFB1I1O43294 461 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 ZNF165P49910 485 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 NFX1Q12986 1120 aaKnown RBP24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 PRPF4BQ13523 1007 aaKnown RBP24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 KNOP1Q1ED39 458 aaKnown RBP24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 COBLL1Q53SF7 1204 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 NELFBQ8WX92 580 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 KCNN1Q92952 543 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 HVCN1Q96D96 273 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 NAT10Q9H0A0 1025 aaKnown RBP24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 ST3GAL5Q9UNP4 418 aa24.59■■□□□ 1.53
CCDC85B-201ENST00000312579 SCN5AQ14524 2016 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 TRIM49BA6NDI0 452 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 ERLIN2O94905 339 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 ARF4P18085 180 aaPredicted RBP24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 SFPQP23246 707 aaKnown RBP eCLIP24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 FAM187BQ17R55 369 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 UVSSAQ2YD98 709 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 PPP4R3CPQ6ZMV5 832 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 ZBTB45Q96K62 511 aaPredicted RBP24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 MED15Q96RN5 788 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 HTATIP2Q9BUP3 242 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 GTPBP4Q9BZE4 634 aaKnown RBP24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 CBX8Q9HC52 389 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 PADI3Q9ULW8 664 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 UBE4BO95155 1302 aa24.58■■□□□ 1.53
CCDC85B-201ENST00000312579 TIMP1P01033 207 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 RAG1P15918 1043 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 STIM1Q13586 685 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 TMEM132AQ24JP5 1023 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 TSHZ1Q6ZSZ6 1077 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 DPF3Q92784 378 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 ACO2Q99798 780 aaKnown RBP24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 MRPL4Q9BYD3 311 aaKnown RBP24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 TMEM206Q9H813 350 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 ERVK-5Q9HDB9 667 aa24.57■■□□□ 1.52
CCDC85B-201ENST00000312579 HNRNPDLO14979 420 aaKnown RBP24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 EVI5O60447 810 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 SYN1P17600 705 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 HOXA11P31270 313 aaPredicted RBP24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 PAK2Q13177 524 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 EEF1DP3Q658K8 133 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 DEFB128Q7Z7B8 93 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 CNTNAP2Q9UHC6 1331 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 TANC1Q9C0D5 1861 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 PSMA7O14818 248 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 CLIC2O15247 247 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 LIG4P49917 911 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 TCTN1Q2MV58 587 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 ATF7IP2Q5U623 682 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 ANKRD40Q6AI12 368 aa24.56■■□□□ 1.52
CCDC85B-201ENST00000312579 ANP32BQ92688 251 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 379.9 ms