RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 PEX26Q7Z412 305 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 KCTD17Q8N5Z5 321 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 TPCN2Q8NHX9 752 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 SEC14L1Q92503 715 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 GLG1Q92896 1179 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 CCDC113Q9H0I3 377 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 ADAM22Q9P0K1 906 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 ARMCX3Q9UH62 379 aaPredicted RBP20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 GTPBP10A4D1E9 387 aaKnown RBP20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 G3V3G9 751 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 CALUO43852 315 aaPredicted RBP20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 UCHL3P15374 230 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 POU5F1Q01860 360 aaKnown RBP20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 KLHL29Q96CT2 875 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 ETAA1Q9NY74 926 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 NAGPAQ9UK23 515 aa20.34■□□□□ 0.85
HERPUD2-201ENST00000311350 POTEB3A0JP26 581 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 MAP3K13O43283 966 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 SNX3O60493 162 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 NR2F2P24468 414 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 HTRA3P83110 453 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 AP3B2Q13367 1082 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 SLC29A2Q14542 456 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 KNOP1Q1ED39 458 aaKnown RBP20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 ARSHQ5FYA8 562 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 POTEBQ6S5H4 581 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 HOOK3Q86VS8 718 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 SYCE1Q8N0S2 351 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 MGARPQ8TDB4 240 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 EPS8L3Q8TE67 593 aaKnown RBP20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 SLITRK6Q9H5Y7 841 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 FAM114A2Q9NRY5 505 aa20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 SUCLA2Q9P2R7 463 aaPredicted RBP20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 GREB1LQ9C091 1923 aaPredicted RBP20.33■□□□□ 0.85
HERPUD2-201ENST00000311350 RGS16O15492 202 aaPredicted RBP20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 FGGP02679 453 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 PLTPP55058 493 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 EIF3BP55884 814 aaKnown RBP20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 EXOC3L4Q17RC7 722 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 TRIM68Q6AZZ1 485 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 VPS36Q86VN1 386 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 ERMNQ8TAM6 284 aa20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 DBR1Q9UK59 544 aaKnown RBP20.33■□□□□ 0.84
HERPUD2-201ENST00000311350 A6NHS1 94 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 PMS2P54278 862 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 GALNTL6Q49A17 601 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 SPDYCQ5MJ68 293 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 SYT2Q8N9I0 419 aaPredicted RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 ZDHHC18Q9NUE0 388 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 FGFR1OP2Q9NVK5 253 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 TTC7AQ9ULT0 858 aaPredicted RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 STXBP5LQ9Y2K9 1186 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 SNX24Q9Y343 169 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 SNUPNO95149 360 aaKnown RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 PON1P27169 355 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 JAM2P57087 298 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 EPHA7Q15375 998 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 ALKBH5Q6P6C2 394 aaKnown RBP20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 SLC17A8Q8NDX2 589 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 ERVK-5Q9HDB9 667 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 MLXIPLQ9NP71 852 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
HERPUD2-201ENST00000311350 MED24O75448 989 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 KRT18P05783 430 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 MSH2P43246 934 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 GIT2Q14161 759 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 CRYGNQ8WXF5 182 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 OSBPL1AQ9BXW6 950 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 SEMA4AQ9H3S1 761 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 HOMER3Q9NSC5 361 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 NKX1-2Q9UD57 310 aaPredicted RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 SERPINB13Q9UIV8 391 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 FOXO6A8MYZ6 492 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 RPL13P26373 211 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 COPS2P61201 443 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 PRPF4BQ13523 1007 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 TAF11Q15544 211 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 PGM2Q96G03 612 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 ANO3Q9BYT9 981 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 PABPC3Q9H361 631 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 TYW1Q9NV66 732 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 DIS3Q9Y2L1 958 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 ZBTB12Q9Y330 459 aaPredicted RBP20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 DAAM1Q9Y4D1 1078 aa20.31■□□□□ 0.84
HERPUD2-201ENST00000311350 NPHP3-ACAD11A0A0J9YXS1 232 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 DPPA5A6NC42 116 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 XRCC5P13010 732 aaKnown RBP20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 SLC9A1P19634 815 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 ATP4AP20648 1035 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 TUBP50607 506 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 KLRC3Q07444 240 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 BNIP1Q12981 228 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 CNGA2Q16280 664 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 NFIL3Q16649 462 aa20.3■□□□□ 0.84
HERPUD2-201ENST00000311350 Q4G0T1 1027 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms