RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 UBE4BO95155 1302 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 MYH11P35749 1972 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 PPP1R37O75864 691 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 UBLCP1Q8WVY7 318 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 GDF3Q9NR23 364 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 PEX10O60683 326 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 SGPL1O95470 568 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 NR3C2P08235 984 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 MUTP22033 750 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 BAG6P46379 1132 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 NNTQ13423 1086 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 SNRNP35Q16560 246 aaKnown RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 TRIM51Q9BSJ1 452 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 TMEM117Q9H0C3 514 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 VWA5AO00534 786 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 KRT5P13647 590 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 CNGA1P29973 690 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 NPTX2P47972 431 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 GNGT1P63211 74 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 BTBD6Q96KE9 485 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 PI4K2AQ9BTU6 479 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
PTPN2-201ENST00000309660 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
PTPN2-201ENST00000309660 TMEM253P0C7T8 217 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 PDCLQ13371 301 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 ANO5Q75V66 913 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 CYFIP1Q7L576 1253 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 SLC47A2Q86VL8 602 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
PTPN2-201ENST00000309660 PGAP2Q9UHJ9 254 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 COG5Q9UP83 839 aa12.48□□□□□ -0.41
PTPN2-201ENST00000309660 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 MTERF2Q49AM1 385 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 RNPC3Q96LT9 517 aaKnown RBP12.47□□□□□ -0.41
PTPN2-201ENST00000309660 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 SUCLA2Q9P2R7 463 aaPredicted RBP12.47□□□□□ -0.41
PTPN2-201ENST00000309660 LCMT1Q9UIC8 334 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 PLAAQ9Y263 795 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 GOLGA8KD6RF30 607 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
PTPN2-201ENST00000309660 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 CAVIN3Q969G5 261 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 TBX20Q9UMR3 447 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 PCDHA10Q9Y5I2 948 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 ANKRD62A6NC57 917 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 MARCKSL1P49006 195 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 KRT76Q01546 638 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 ANGEL2Q5VTE6 544 aaKnown RBP12.47□□□□□ -0.41
PTPN2-201ENST00000309660 ALS2CLQ60I27 953 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 LMO3Q8TAP4 145 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 GLG1Q92896 1179 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 DBR1Q9UK59 544 aaKnown RBP12.47□□□□□ -0.41
PTPN2-201ENST00000309660 ALG6Q9Y672 507 aa12.47□□□□□ -0.41
PTPN2-201ENST00000309660 IVLP07476 585 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 ADSSP30520 456 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 CTNNA1P35221 906 aaKnown RBP12.46□□□□□ -0.41
PTPN2-201ENST00000309660 JAK3P52333 1124 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 NFIL3Q16649 462 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 CCDC26Q8TAB7 109 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 TAS1R2Q8TE23 839 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 SEMA4DQ92854 862 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 SPOPO43791 374 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 MMEP08473 750 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 CCND2P30279 289 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
PTPN2-201ENST00000309660 FLT3P36888 993 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 BACE1P56817 501 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 C2CD6Q53TS8 623 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 CPNE8Q86YQ8 564 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 ALG3Q92685 438 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 KRT35Q92764 455 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms