RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 EXOC1Q9NV70 894 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 PIN4Q9Y237 131 aaKnown RBP19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 SLC16A4O15374 487 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 LIG1P18858 919 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 EPHB4P54760 987 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 GTF2BQ00403 316 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 COASYQ13057 564 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 CUL4BQ13620 913 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 KCNB1Q14721 858 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 RASIP1Q5U651 963 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 SLC24A5Q71RS6 500 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 OTOP2Q7RTS6 562 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 ZNF720Q7Z2F6 126 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 TDHQ8IZJ6 230 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 RNPC3Q96LT9 517 aaKnown RBP19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 ADPGKQ9BRR6 497 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 PRO3102Q9H379 93 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 RGS18Q9NS28 235 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 EXOC7Q9UPT5 735 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 SLC4A7Q9Y6M7 1214 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 ADGRA3Q8IWK6 1321 aa19.69■□□□□ 0.74
SSSCA1-201ENST00000309328 ZBBXA8MT70 800 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 N4BP3O15049 544 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 TSPAN1O60635 241 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 KIF20AO95235 890 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 DPYDQ12882 1025 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 DSC3Q14574 896 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 AMHR2Q16671 573 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 TMEM132AQ24JP5 1023 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 FAM26FQ5R3K3 315 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 TWF2Q6IBS0 349 aaKnown RBP19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 ZPBP2Q6X784 338 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 HACE1Q8IYU2 909 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 GSDMAQ96QA5 445 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 ADAM2Q99965 735 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 KIFC3Q9BVG8 833 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 BLZF1Q9H2G9 400 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 TMX1Q9H3N1 280 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 POLD4Q9HCU8 107 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 UBE4BO95155 1302 aa19.68■□□□□ 0.74
SSSCA1-201ENST00000309328 A0A1B0GUA9 196 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 EIF3DO15371 548 aaKnown RBP eCLIP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 CSDE1O75534 798 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 RPN1P04843 607 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 STAG3L1P0CL83 205 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 SARSP49591 514 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 WDR5P61964 334 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 EHHADHQ08426 723 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 MAP4K3Q8IVH8 894 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 FIZ1Q96SL8 496 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 ELAC1Q9H777 363 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 TMEM206Q9H813 350 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 TBX20Q9UMR3 447 aa19.67■□□□□ 0.74
SSSCA1-201ENST00000309328 A0A0U1RQF3 1178 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 ENPP3O14638 875 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 HOXA2O43364 376 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 GCNT3O95395 438 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 EOMESO95936 686 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 PIGRP01833 764 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 ARF4P18085 180 aaPredicted RBP19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 HOXA11P31270 313 aaPredicted RBP19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 MCM4P33991 863 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 DCAF4L1Q3SXM0 396 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 GRAMD1CQ8IYS0 662 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 SMARCE1Q969G3 411 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 OSBPL7Q9BZF2 842 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 TNFSF13BQ9Y275 285 aa19.66■□□□□ 0.74
SSSCA1-201ENST00000309328 ZNF623O75123 536 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 TOM1L1O75674 476 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 PPP1R37O75864 691 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 RHOBTB3O94955 611 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 FGFR4P22455 802 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 SNRPFP62306 86 aaKnown RBP19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 FAM189BP81408 668 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 HSP90AA2PQ14568 343 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 SHHQ15465 462 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 L1TD1Q5T7N2 865 aaKnown RBP19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 ATF7IP2Q5U623 682 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 NPAS4Q8IUM7 802 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 SPATA20Q8TB22 786 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 PGBD4Q96DM1 585 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 BICD1Q96G01 975 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 ACCSQ96QU6 501 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 STRA6Q9BX79 667 aa19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 TRIM6Q9C030 488 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-201ENST00000309328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 C9IYK1 514 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 HNRNPDLO14979 420 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 KLRC4O43908 158 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 ATP2A2P16615 1042 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 NMT1P30419 496 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 KYAT1Q16773 422 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 KMT5BQ4FZB7 885 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 TAS1R3Q7RTX0 852 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 TOP1MTQ969P6 601 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 ACO2Q99798 780 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 UBN1Q9NPG3 1134 aa19.64■□□□□ 0.73
SSSCA1-201ENST00000309328 FAM105AQ9NUU6 356 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms