RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TTC7AQ9ULT0 858 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ARL2BPQ9Y2Y0 163 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 GPR75-ASB3A0A0A6YYF3 556 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 KRT16P08779 473 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 DLATP10515 647 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CCND1P24385 295 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF131P52739 623 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 SLC30A10Q6XR72 485 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 EXOC3L1Q86VI1 746 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 SRRM1Q8IYB3 904 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 C1orf54Q8WWF1 131 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 AGPAT1Q99943 283 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 EPB41L4BQ9H329 900 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 APEX2Q9UBZ4 518 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 SERPINB13Q9UIV8 391 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 RARGP13631 454 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CREB1P16220 341 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 RPA1P27694 616 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 HOXD13P35453 343 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 PCK1P35558 622 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 MSH2P43246 934 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 YIPF3Q9GZM5 350 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 GLT8D2Q9H1C3 349 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CDC42EP4Q9H3Q1 356 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CTNNAL1Q9UBT7 734 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CNOT7Q9UIV1 285 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 COG5Q9UP83 839 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 ENO4A6NNW6 628 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 GTF2IP78347 998 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 PPATQ06203 517 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CBWD6Q4V339 395 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CBWD3Q5JTY5 395 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 CBWD5Q5RIA9 395 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 TLDC1Q6P9B6 456 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 RPUSD2Q8IZ73 545 aaKnown RBP11.98□□□□□ -0.49
PTPN7-201ENST00000309017 BTBD6Q96KE9 485 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 ZSWIM1Q9BR11 485 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 PCIF1Q9H4Z3 704 aa11.98□□□□□ -0.49
PTPN7-201ENST00000309017 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 RARAP10276 462 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 VCAM1P19320 739 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 HOXA13P31271 388 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 SSR1P43307 286 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 GPC5P78333 572 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 TNIP1Q15025 636 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 ODR4Q5SWX8 454 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 BZW1Q7L1Q6 419 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 MRRFQ96E11 262 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 POP1Q99575 1024 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 PLVAPQ9BX97 442 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 TXLNGYQ9BZA5 131 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 NCANO14594 1321 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 G3V3G9 751 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 COILP38432 576 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 SATB1Q01826 763 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 RIPK1Q13546 671 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 KYNUQ16719 465 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 RNF207Q6ZRF8 634 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 FAXDC2Q96IV6 333 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 PARVGQ9HBI0 331 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 ANKRD63C9JTQ0 380 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 PPP1R12AO14974 1030 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 PYGMP11217 842 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 ADCY8P40145 1251 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 SARNPP82979 210 aaKnown RBP11.97□□□□□ -0.49
PTPN7-201ENST00000309017 EBF2Q9HAK2 575 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 KCNMB3Q9NPA1 279 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 GGA1Q9UJY5 639 aa11.97□□□□□ -0.49
PTPN7-201ENST00000309017 PFASO15067 1338 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 TCRBV7S2A1N4TA0A589 114 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 GTPBP10A4D1E9 387 aaKnown RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 GAP43P17677 238 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 GJC1P36383 396 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 DRG2P55039 364 aaKnown RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 KRT17Q04695 432 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF268Q14587 947 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF653Q96CK0 615 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 SAAL1Q96ER3 474 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 EIF2AK1Q9BQI3 630 aaKnown RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 CCDC77Q9BR77 488 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 PITPNM3Q9BZ71 974 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 KIF9Q9HAQ2 790 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
PTPN7-201ENST00000309017 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
PTPN7-201ENST00000309017 H0Y3Z8 333 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms