RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 RAB11FIP4Q86YS3 637 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 NELL1Q92832 810 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 PHKBQ93100 1093 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 FAM193BQ96PV7 902 aaPredicted RBP13.36□□□□□ -0.27
SMIM4-201ENST00000307106 TMEM175Q9BSA9 504 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 HERC2P3Q9BVR0 1158 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 TICRRQ7Z2Z1 1910 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
SMIM4-201ENST00000307106 FAM170BA6NMN3 283 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 NRP1O14786 923 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF623O75123 536 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 PAPLNO95428 1278 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 OATP04181 439 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 CALM1P0DP23 149 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 CALM2P0DP24 149 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 CALM3P0DP25 149 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 GLUD2P49448 558 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 ADCY7P51828 1080 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 PRKCQQ04759 706 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 DRP2Q13474 957 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 COL9A3Q14050 684 aaPredicted RBP13.35□□□□□ -0.27
SMIM4-201ENST00000307106 TSSK4Q6SA08 328 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 TEX2Q8IWB9 1127 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 NETO1Q8TDF5 533 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 FGF14Q92915 247 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 PGBD4Q96DM1 585 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 ZFP37Q9Y6Q3 630 aaPredicted RBP13.35□□□□□ -0.27
SMIM4-201ENST00000307106 ATRXP46100 2492 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
SMIM4-201ENST00000307106 A0A087WZ62 844 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 SLC30A4O14863 429 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF862O60290 1169 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 PARM1Q6UWI2 310 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 AGMOQ6ZNB7 445 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 FDXACB1Q9BRP7 624 aaPredicted RBP13.34□□□□□ -0.27
SMIM4-201ENST00000307106 MTA3Q9BTC8 594 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 PRKD2Q9BZL6 878 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 PLEKHA4Q9H4M7 779 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 RXFP1Q9HBX9 757 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 LTB4R2Q9NPC1 389 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 MARCH5Q9NX47 278 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 ZDHHC7Q9NXF8 308 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
SMIM4-201ENST00000307106 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
SMIM4-201ENST00000307106 VWA8A3KMH1 1905 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 SMCO2A6NFE2 343 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 PRC1O43663 620 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 POMCP01189 267 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 CD72P21854 359 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 FSHRP23945 695 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 CDC42EP1Q00587 391 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 PRKCEQ02156 737 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 DMWDQ09019 674 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 ZBTB41Q5SVQ8 909 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 RAB23Q9ULC3 237 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-201ENST00000307106 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
SMIM4-201ENST00000307106 WDR64B1ANS9 1081 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 TGM5O43548 720 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 CYP3A4P08684 503 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 KCNA4P22459 653 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 PFKPQ01813 784 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 DSG1Q02413 1049 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 LPAL2Q16609 132 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 MTSS1LQ765P7 747 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
SMIM4-201ENST00000307106 GLYCTKQ8IVS8 523 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms