RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 FUCA2Q9BTY2 467 aa29.83■■■□□ 2.37
HDAC3-201ENST00000305264 AGO3Q9H9G7 860 aaKnown RBP29.83■■■□□ 2.37
HDAC3-201ENST00000305264 B4GALT5O43286 388 aa29.82■■■□□ 2.36
HDAC3-201ENST00000305264 ADSSL1Q8N142 457 aa29.82■■■□□ 2.36
HDAC3-201ENST00000305264 GUF1Q8N442 669 aaKnown RBP29.82■■■□□ 2.36
HDAC3-201ENST00000305264 GTPBP4Q9BZE4 634 aaKnown RBP29.82■■■□□ 2.36
HDAC3-201ENST00000305264 UBE4BO95155 1302 aa29.82■■■□□ 2.36
HDAC3-201ENST00000305264 PPP1R3GB7ZBB8 358 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 SCP2P22307 547 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 STRN3Q13033 797 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 STX1AQ16623 288 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 COBLL1Q53SF7 1204 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 PRMT7Q9NVM4 692 aaPredicted RBP29.81■■■□□ 2.36
HDAC3-201ENST00000305264 SFPQP23246 707 aaKnown RBP eCLIP29.81■■■□□ 2.36
HDAC3-201ENST00000305264 GPNMBQ14956 572 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 ACCSQ96QU6 501 aa29.81■■■□□ 2.36
HDAC3-201ENST00000305264 TSPAN1O60635 241 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 RPS6KA5O75582 802 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 ABCD1P33897 745 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 FAM187BQ17R55 369 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 PPP4R3CPQ6ZMV5 832 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 CATSPER4Q7RTX7 472 aa29.8■■■□□ 2.36
HDAC3-201ENST00000305264 ACKR2O00590 384 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 NBNO60934 754 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 CD52P31358 61 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 TSHZ1Q6ZSZ6 1077 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 TET1Q8NFU7 2136 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 CNTNAP2Q9UHC6 1331 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 ERLIN2O94905 339 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 TIMP1P01033 207 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 CCDC192P0DO97 292 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 KLHL10Q6JEL2 608 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 C11orf57Q6ZUT1 292 aaPredicted RBP29.79■■■□□ 2.36
HDAC3-201ENST00000305264 MLKLQ8NB16 471 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 PRIMPOLQ96LW4 560 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 ANO10Q9NW15 660 aa29.79■■■□□ 2.36
HDAC3-201ENST00000305264 TISP43B9A030 160 aa29.78■■■□□ 2.36
HDAC3-201ENST00000305264 PRPF4BQ13523 1007 aaKnown RBP29.78■■■□□ 2.36
HDAC3-201ENST00000305264 KNOP1Q1ED39 458 aaKnown RBP29.78■■■□□ 2.36
HDAC3-201ENST00000305264 BICD1Q96G01 975 aa29.78■■■□□ 2.36
HDAC3-201ENST00000305264 TARS2Q9BW92 718 aaKnown RBP29.78■■■□□ 2.36
HDAC3-201ENST00000305264 KCTD10Q9H3F6 313 aa29.78■■■□□ 2.36
HDAC3-201ENST00000305264 ST3GAL5Q9UNP4 418 aa29.78■■■□□ 2.36
HDAC3-201ENST00000305264 HNRNPDLO14979 420 aaKnown RBP29.77■■■□□ 2.36
HDAC3-201ENST00000305264 EVI5O60447 810 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 RAG1P15918 1043 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 SYCP3Q8IZU3 236 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 CPB2Q96IY4 423 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 MRPL4Q9BYD3 311 aaKnown RBP29.77■■■□□ 2.36
HDAC3-201ENST00000305264 TMEM206Q9H813 350 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 PADI3Q9ULW8 664 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 CTNND2Q9UQB3 1225 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 SQORQ9Y6N5 450 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 LTBP2Q14767 1821 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 KIF20AO95235 890 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 ARF4P18085 180 aaPredicted RBP29.77■■■□□ 2.36
HDAC3-201ENST00000305264 NFX1Q12986 1120 aaKnown RBP29.77■■■□□ 2.36
HDAC3-201ENST00000305264 PAK2Q13177 524 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 STIM1Q13586 685 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 SLC39A4Q6P5W5 647 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 DNAJC25Q9H1X3 360 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 ERVK-5Q9HDB9 667 aa29.77■■■□□ 2.36
HDAC3-201ENST00000305264 PCBP1Q15365 356 aaKnown RBP eCLIP29.76■■■□□ 2.35
HDAC3-201ENST00000305264 USP38Q8NB14 1042 aa29.76■■■□□ 2.35
HDAC3-201ENST00000305264 SEMA6BQ9H3T3 888 aa29.76■■■□□ 2.35
HDAC3-201ENST00000305264 AGPAT5Q9NUQ2 364 aa29.76■■■□□ 2.35
HDAC3-201ENST00000305264 EXOC7Q9UPT5 735 aa29.76■■■□□ 2.35
HDAC3-201ENST00000305264 TGFB1I1O43294 461 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 PIGRP01833 764 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 HOXA11P31270 313 aaPredicted RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 CDR2LQ86X02 465 aaPredicted RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 ACO2Q99798 780 aaKnown RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 GBP3Q9H0R5 595 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 PRKAG2Q9UGJ0 569 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 ANKRD63C9JTQ0 380 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 PSMA7O14818 248 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 PMS1P54277 932 aaKnown RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 ANO6Q4KMQ2 910 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 NELFBQ8WX92 580 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 DPF3Q92784 378 aa29.75■■■□□ 2.35
HDAC3-201ENST00000305264 IFIH1Q9BYX4 1025 aaKnown RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 PIN4Q9Y237 131 aaKnown RBP29.75■■■□□ 2.35
HDAC3-201ENST00000305264 TRIM49BA6NDI0 452 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 GPR182O15218 404 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 PPP1R2P41236 205 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 LIG4P49917 911 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 TMEM132AQ24JP5 1023 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 ATF7IP2Q5U623 682 aa29.74■■■□□ 2.35
HDAC3-201ENST00000305264 DHTKD1Q96HY7 919 aaPredicted RBP29.74■■■□□ 2.35
HDAC3-201ENST00000305264 PAK1Q13153 545 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 ZPBP2Q6X784 338 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 ZBTB45Q96K62 511 aaPredicted RBP29.73■■■□□ 2.35
HDAC3-201ENST00000305264 TMX1Q9H3N1 280 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 DACH1Q9UI36 760 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 SYN1P17600 705 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 STX17P56962 302 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 ZCWPW2Q504Y3 356 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 EEF1DP3Q658K8 133 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 CENPPQ6IPU0 288 aa29.73■■■□□ 2.35
HDAC3-201ENST00000305264 MFSD5Q6N075 450 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms