RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ZBBXA8MT70 800 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 ACKR2O00590 384 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 EFCAB14O75071 495 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 PRPF4BQ13523 1007 aaKnown RBP26.93■■□□□ 1.9
HOXC9-201ENST00000303450 AMHR2Q16671 573 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 TMEM132AQ24JP5 1023 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 KMT5BQ4FZB7 885 aa26.93■■□□□ 1.9
HOXC9-201ENST00000303450 MTIF3Q9H2K0 278 aaKnown RBP26.93■■□□□ 1.9
HOXC9-201ENST00000303450 SMC2O95347 1197 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 GCNT3O95395 438 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 AXLP30530 894 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 BMP8BP34820 402 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 FAM26FQ5R3K3 315 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 GPT2Q8TD30 523 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 HERVK_113Q902F9 699 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 HPS3Q969F9 1004 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 ADAM2Q99965 735 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 ST6GALNAC4Q9H4F1 302 aa26.92■■□□□ 1.9
HOXC9-201ENST00000303450 B4GALT5O43286 388 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 MBD3O95983 291 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 GTF2BQ00403 316 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 ZC2HC1CQ53FD0 456 aaPredicted RBP26.91■■□□□ 1.9
HOXC9-201ENST00000303450 C9orf50Q5SZB4 431 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 CHRDL2Q6WN34 429 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 TAS1R3Q7RTX0 852 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 CPB2Q96IY4 423 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 TBX20Q9UMR3 447 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 PCDHB13Q9Y5F0 798 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 MICAL3Q7RTP6 2002 aa26.91■■□□□ 1.9
HOXC9-201ENST00000303450 ENPP3O14638 875 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 MGEA5O60502 916 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 ARF4P18085 180 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 HOXA11P31270 313 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 KCNJ6P48051 423 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 EHHADHQ08426 723 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 DSC3Q14574 896 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 SHHQ15465 462 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 CAMK4Q16566 473 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 TWF2Q6IBS0 349 aaKnown RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 NOTUMQ6P988 496 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 ERCC4Q92889 916 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 KCNN1Q92952 543 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 MRPL4Q9BYD3 311 aaKnown RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 TSPYL2Q9H2G4 693 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 CNTNAP2Q9UHC6 1331 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 PSMD2Q13200 908 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 ALCAMQ13740 583 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 STXBP4Q6ZWJ1 553 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 RTN4RL1Q86UN2 441 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 SMARCE1Q969G3 411 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 RNPC3Q96LT9 517 aaKnown RBP26.9■■□□□ 1.9
HOXC9-201ENST00000303450 RGS18Q9NS28 235 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 USP20Q9Y2K6 914 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 PCDHA5Q9Y5H7 936 aa26.9■■□□□ 1.9
HOXC9-201ENST00000303450 MYBP10242 640 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 CASP5P51878 434 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 WDR5P61964 334 aaKnown RBP26.89■■□□□ 1.89
HOXC9-201ENST00000303450 LINC01599Q8WXQ3 324 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 HVCN1Q96D96 273 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 BICD1Q96G01 975 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 FGFBP2Q9BYJ0 223 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 CLSTN2Q9H4D0 955 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 SLC39A2Q9NP94 309 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 C1orf112Q9NSG2 853 aa26.89■■□□□ 1.89
HOXC9-201ENST00000303450 CXXC1Q9P0U4 656 aaPredicted RBP26.89■■□□□ 1.89
HOXC9-201ENST00000303450 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.88■■□□□ 1.89
HOXC9-201ENST00000303450 TTLL13PA6NNM8 815 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 EDN1P05305 212 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 KCNB1Q14721 858 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 NT5DC1Q5TFE4 455 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 PRPF38BQ5VTL8 546 aaKnown RBP26.88■■□□□ 1.89
HOXC9-201ENST00000303450 SLC24A5Q71RS6 500 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 CCDC51Q96ER9 411 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 GSDMAQ96QA5 445 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 STRA6Q9BX79 667 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 RMND1Q9NWS8 449 aa26.88■■□□□ 1.89
HOXC9-201ENST00000303450 A0A1B0GUA9 196 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 PPP1R37O75864 691 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 RHOBTB3O94955 611 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 AMHP03971 560 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 PTMSP20962 102 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 ATF7IP2Q5U623 682 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.87■■□□□ 1.89
HOXC9-201ENST00000303450 TARS2Q9BW92 718 aaKnown RBP26.87■■□□□ 1.89
HOXC9-201ENST00000303450 NUP62CLQ9H1M0 184 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 SLC4A7Q9Y6M7 1214 aa26.87■■□□□ 1.89
HOXC9-201ENST00000303450 N4BP3O15049 544 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 IBSPP21815 317 aaPredicted RBP26.86■■□□□ 1.89
HOXC9-201ENST00000303450 L1TD1Q5T7N2 865 aaKnown RBP26.86■■□□□ 1.89
HOXC9-201ENST00000303450 CDR2LQ86X02 465 aaPredicted RBP26.86■■□□□ 1.89
HOXC9-201ENST00000303450 MAP4K3Q8IVH8 894 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 MYOCDQ8IZQ8 938 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 GLIS3Q8NEA6 775 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 SPATA20Q8TB22 786 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 ACCSQ96QU6 501 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 ACO2Q99798 780 aaKnown RBP26.86■■□□□ 1.89
HOXC9-201ENST00000303450 EXOC7Q9UPT5 735 aa26.86■■□□□ 1.89
HOXC9-201ENST00000303450 EIF3DO15371 548 aaKnown RBP eCLIP26.85■■□□□ 1.89
HOXC9-201ENST00000303450 PRPF6O94906 941 aaKnown RBP26.85■■□□□ 1.89
HOXC9-201ENST00000303450 STK4Q13043 487 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms