RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ADCY1Q08828 1119 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 KNOP1Q1ED39 458 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 SFR1Q86XK3 245 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 DZIP1Q86YF9 867 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 FAM13CQ8NE31 585 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 STK32AQ8WU08 396 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 POP1Q99575 1024 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 PLCD4Q9BRC7 762 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 ROPN1BQ9BZX4 212 aaPredicted RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 TRIM7Q9C029 511 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 GPR88Q9GZN0 384 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 ROPN1Q9HAT0 212 aaPredicted RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 PCDHA12Q9UN75 941 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 ALG6Q9Y672 507 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 KRT18P05783 430 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 ATP6V1C1P21283 382 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 TARSP26639 723 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
ZNF558-201ENST00000301475 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 FBF1Q8TES7 1133 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 NT5C3AQ9H0P0 336 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
ZNF558-201ENST00000301475 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 PODXLO00592 558 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 SMIM24O75264 130 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MED24O75448 989 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 BRAFP15056 766 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 LMNB1P20700 586 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 PCK1P35558 622 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 STAT3P40763 770 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 KCNA1Q09470 495 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MTFR1Q15390 333 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 ERP27Q96DN0 273 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 RAB3IPQ96QF0 476 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 EYA3Q99504 573 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CHORDC1Q9UHD1 332 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 H0Y3Z8 333 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CLIC2O15247 247 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 NR3C1P04150 777 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CETPP11597 493 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 HIBADHP31937 336 aaKnown RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 FOXN2P32314 431 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 GBP1P32455 592 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CHKAP35790 457 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MRPS35P82673 323 aaKnown RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MXRA7P84157 204 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 CPNE8Q86YQ8 564 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MFN1Q8IWA4 741 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 RUNDC3BQ96NL0 473 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 SERPINB12Q96P63 405 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
ZNF558-201ENST00000301475 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
ZNF558-201ENST00000301475 PITPNM2Q9BZ72 1349 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 LRRD1A4D1F6 860 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 NPTXRO95502 500 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 TAC1P20366 129 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 STX2P32856 288 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 ROR2Q01974 943 aaKnown RBP11.68□□□□□ -0.54
ZNF558-201ENST00000301475 CCDC15Q0P6D6 951 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 GRIK5Q16478 980 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 PARP6Q2NL67 630 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 TTC8Q8TAM2 541 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 ASAP3Q8TDY4 903 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 NUDCD1Q96RS6 583 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 TXLNGQ9NUQ3 528 aa11.68□□□□□ -0.54
ZNF558-201ENST00000301475 SEPT11Q9NVA2 429 aaKnown RBP11.68□□□□□ -0.54
ZNF558-201ENST00000301475 HAO1Q9UJM8 370 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms