RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 TAS2R14Q9NYV8 317 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 PRR12Q9ULL5 1215 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 ARHGAP42A6NI28 874 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 SKAP2O75563 359 aaPredicted RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 FLT3P36888 993 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 GIT2Q14161 759 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 PPP2R5EQ16537 467 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 DAB2IPQ5VWQ8 1189 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 CCDC110Q8TBZ0 833 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 ISCUQ9H1K1 167 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 APEX2Q9UBZ4 518 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 FAM107AO95990 144 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 ATP2A2P16615 1042 aaKnown RBP14.25□□□□□ -0.13
CASC4-201ENST00000299957 MAN1A1P33908 653 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 PPP2R5CQ13362 524 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 MTMR1Q13613 665 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 RINT1Q6NUQ1 792 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 RHOT2Q8IXI1 618 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 FAM20AQ96MK3 541 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 XPO6Q96QU8 1125 aaKnown RBP14.25□□□□□ -0.13
CASC4-201ENST00000299957 H7C0C1 242 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 INO80B-WBP1J3KQ70 363 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 ATP5OP48047 213 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 BARGINQ6ZT62 677 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 CFAP61Q8NHU2 1237 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 TTC17Q96AE7 1141 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 CYTH2Q99418 400 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
CASC4-201ENST00000299957 TMEM117Q9H0C3 514 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 PICK1Q9NRD5 415 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 TOPORSQ9NS56 1045 aaPredicted RBP14.25□□□□□ -0.13
CASC4-201ENST00000299957 FOXO6A8MYZ6 492 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 EML1O00423 815 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 EYA4O95677 639 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 IL9RQ01113 521 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 TGS1Q96RS0 853 aaKnown RBP14.25□□□□□ -0.13
CASC4-201ENST00000299957 ERP44Q9BS26 406 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 MST1RQ04912 1400 aa14.25□□□□□ -0.13
CASC4-201ENST00000299957 PLS3P13797 630 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 CALRP27797 417 aaKnown RBP14.24□□□□□ -0.13
CASC4-201ENST00000299957 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 MEI1Q5TIA1 1274 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 PPFIBP2Q8ND30 876 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 HAS1Q92839 578 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 ECE2O60344 883 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 TLR2O60603 784 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 ARP10275 920 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 KITP10721 976 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 SCP2P22307 547 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 RPA1P27694 616 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 EIF3BP55884 814 aaKnown RBP14.24□□□□□ -0.13
CASC4-201ENST00000299957 CCDC62Q6P9F0 684 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 LDHDQ86WU2 507 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 BAP1Q92560 729 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 ARHGEF26Q96DR7 871 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 EDEM3Q9BZQ6 932 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 CNOT10Q9H9A5 744 aaKnown RBP14.24□□□□□ -0.13
CASC4-201ENST00000299957 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.131e-16■■■■■ 46.1
CASC4-201ENST00000299957 SGPL1O95470 568 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 SLC8A1P32418 973 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 ADCY2Q08462 1091 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 SLMAPQ14BN4 828 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 TAF11Q15544 211 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 CLUL1Q15846 466 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 SWSAP1Q6NVH7 229 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 ZNF354CQ86Y25 554 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 KRT35Q92764 455 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 QTRT2Q9H974 415 aaKnown RBP14.24□□□□□ -0.13
CASC4-201ENST00000299957 TMEM120BA0PK00 339 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 DIAPH2O60879 1101 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 MSH2P43246 934 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 GPS1Q13098 491 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 STK33Q9BYT3 514 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 SLITRK6Q9H5Y7 841 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 TPX2Q9ULW0 747 aaKnown RBP14.24□□□□□ -0.13
CASC4-201ENST00000299957 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
CASC4-201ENST00000299957 DCDC2CA8MYV0 355 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 AGPSO00116 658 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 MARCKSL1P49006 195 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 MDH1BQ5I0G3 518 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 FAM182AQ5T1J6 154 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 TNS2Q63HR2 1409 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 CBWD2Q8IUF1 395 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 PWWP2AQ96N64 755 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
CASC4-201ENST00000299957 L3MBTL1Q9Y468 752 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms