RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 NLRC5Q86WI3 1866 aa6.58□□□□□ -1.36
SSX3-201ENST00000298396 TDRD15B5MCY1 1934 aaKnown RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 A0A1B0GVL5 298 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 A0A1W2PQ27 194 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 A0A1W2PQ64 194 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 A0A1W2PQD8 194 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 C17orf102A2RUQ5 167 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 SLC26A4O43511 780 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 PQBP1O60828 265 aaKnown RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 EYA4O95677 639 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 PFKFB1P16118 471 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 MUTP22033 750 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 CMA1P23946 247 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 KLRC1P26715 233 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 CLCN3P51790 818 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 NDUFA8P51970 172 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 SLC12A3P55017 1021 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 FOXK2Q01167 660 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 PTPN11Q06124 597 aaPredicted RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 DPYDQ12882 1025 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 MAPK7Q13164 816 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 SNW1Q13573 536 aaKnown RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 GPNMBQ14956 572 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ZRSR1Q15695 479 aaKnown RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 PTGISQ16647 500 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 SWI5Q1ZZU3 235 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 TCTN1Q2MV58 587 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 MTERF2Q49AM1 385 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 FAM47CQ5HY64 1035 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ZNF484Q5JVG2 852 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 KRT79Q5XKE5 535 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 HAUS3Q68CZ6 603 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ADALQ6DHV7 355 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 C1orf186Q6ZWK4 172 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 CKAP2LQ8IYA6 745 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 KIAA0319LQ8IZA0 1049 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 DAW1Q8N136 415 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 LRRC71Q8N4P6 559 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 PDILTQ8N807 584 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 C7orf31Q8N865 590 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ENGASEQ8NFI3 743 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ERMNQ8TAM6 284 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 STK32AQ8WU08 396 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 BSNDQ8WZ55 320 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 RAD54LQ92698 747 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 VTI1AQ96AJ9 217 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 NOC4LQ9BVI4 516 aaKnown RBP6.57□□□□□ -1.36
SSX3-201ENST00000298396 RAB34Q9BZG1 259 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 BHMT2Q9H2M3 363 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ANKEF1Q9NU02 776 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 LMBRD1Q9NUN5 540 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 TUBE1Q9UJT0 475 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 COL4A6Q14031 1691 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 RALGAPA2Q2PPJ7 1873 aa6.57□□□□□ -1.36
SSX3-201ENST00000298396 NRCAMQ92823 1304 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 KDM3AQ9Y4C1 1321 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 MYMKA6NI61 221 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RRN3P2A6NIE6 340 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RSPH10B2B2RC85 870 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
SSX3-201ENST00000298396 MAFO75444 373 aaPredicted RBP6.56□□□□□ -1.36
SSX3-201ENST00000298396 STAU1O95793 577 aaKnown RBP6.56□□□□□ -1.36
SSX3-201ENST00000298396 PLA2G4BP0C869 781 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RSPH10BP0C881 870 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 XRCC6P12956 609 aaKnown RBP eCLIP6.56□□□□□ -1.36
SSX3-201ENST00000298396 BMP1P13497 986 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 LIG1P18858 919 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 CASP1P29466 404 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 UBA7P41226 1012 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 SEC13P55735 322 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RELBQ01201 579 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RBL2Q08999 1139 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 MGAT3Q09327 533 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 EMC2Q15006 297 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 XKR9Q5GH70 373 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 RINT1Q6NUQ1 792 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 GRAMD1CQ8IYS0 662 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
SSX3-201ENST00000298396 FSIP1Q8NA03 581 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 ASAP3Q8TDY4 903 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 TMEM143Q96AN5 459 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 CEP170P1Q96L14 293 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 NACC1Q96RE7 527 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 GRIP2Q9C0E4 1043 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 FAM49AQ9H0Q0 323 aaPredicted RBP6.56□□□□□ -1.36
SSX3-201ENST00000298396 WNT8AQ9H1J5 351 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 NRBP2Q9NSY0 501 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 SERTAD1Q9UHV2 236 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 KCNH3Q9ULD8 1083 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 PCDHA2Q9Y5H9 948 aa6.56□□□□□ -1.36
SSX3-201ENST00000298396 MROH7Q68CQ1 1323 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ADGRA3Q8IWK6 1321 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms