RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 THAP2Q9H0W7 228 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 PCIF1Q9H4Z3 704 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 PKD2L1Q9P0L9 805 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 COG5Q9UP83 839 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 DOCK1Q14185 1865 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 H0YGN5 161 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 NCKAP1LP55160 1127 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 MTMR1Q13613 665 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 MAEAQ7L5Y9 396 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 HAUS6Q7Z4H7 955 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 XXYLT1Q8NBI6 393 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 ZSWIM2Q8NEG5 633 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 TAAR1Q96RJ0 339 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 CARD9Q9H257 536 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 NEUROG2Q9H2A3 272 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 GINM1Q9NU53 330 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 HSPBP1Q9NZL4 362 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 RRP15Q9Y3B9 282 aaKnown RBP21.4■■□□□ 1.02
NFIL3-201ENST00000297689 NFS1Q9Y697 457 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 YWHABP31946 246 aaKnown RBP21.39■■□□□ 1.01
NFIL3-201ENST00000297689 UGCGQ16739 394 aa21.39■■□□□ 1.01
NFIL3-201ENST00000297689 A6NNZ2 444 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 MYO1CO00159 1063 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 EIF3HO15372 352 aaKnown RBP eCLIP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 ALAS1P13196 640 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 PGM5Q15124 567 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 UAP1Q16222 522 aaPredicted RBP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 TUBB8Q3ZCM7 444 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 LRIG3Q6UXM1 1119 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 DDX42Q86XP3 938 aaKnown RBP eCLIP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 SLC20A1Q8WUM9 679 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 RAVER2Q9HCJ3 691 aaKnown RBP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 UBE2TQ9NPD8 197 aaPredicted RBP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 NR2E1Q9Y466 385 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 PARP14Q460N5 1801 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 ATP9AO75110 1047 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 ABCB4P21439 1286 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 RPS6P62753 249 aaKnown RBP21.38■■□□□ 1.01
NFIL3-201ENST00000297689 MTMR2Q13614 643 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 SYT17Q9BSW7 474 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 AMACRQ9UHK6 382 aa21.38■■□□□ 1.01
NFIL3-201ENST00000297689 BACH1O14867 736 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 CCNE2O96020 404 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 VCAM1P19320 739 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 PRAMEF18Q5VWM3 479 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 KDM7AQ6ZMT4 941 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 MAATS1Q7Z4T9 603 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 RHOT2Q8IXI1 618 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 SH2D3CQ8N5H7 860 aa21.37■■□□□ 1.01
NFIL3-201ENST00000297689 HSD17B3P37058 310 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 GCLMP48507 274 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 PDCD2LQ9BRP1 358 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 TMEM117Q9H0C3 514 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 ANKEF1Q9NU02 776 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 FZD1Q9UP38 647 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 TMEM150BA6NC51 233 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 FGGP02679 453 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 ADRB2P07550 413 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 ADSSP30520 456 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 PTENP60484 403 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 PSMC5P62195 406 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 CETN1Q12798 172 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 FAM71AQ8IYT1 594 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 PROCA1Q8NCQ7 364 aaPredicted RBP21.36■■□□□ 1.01
NFIL3-201ENST00000297689 CCDC26Q8TAB7 109 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 TRPM4Q8TD43 1214 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 ALG3Q92685 438 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 TRERF1Q96PN7 1200 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 GPRC5CQ9NQ84 441 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 FEZ2Q9UHY8 353 aaPredicted RBP21.36■■□□□ 1.01
NFIL3-201ENST00000297689 PLAAQ9Y263 795 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 COQ4Q9Y3A0 265 aa21.36■■□□□ 1.01
NFIL3-201ENST00000297689 TTI1O43156 1089 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 CHRNB2P17787 502 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 EIF2AK2P19525 551 aaKnown RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 GNGT1P63211 74 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 ANGEL2Q5VTE6 544 aaKnown RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 C11orf63Q6NUN7 778 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 SLC17A8Q8NDX2 589 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 ATP6V1G3Q96LB4 118 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 IWS1Q96ST2 819 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 SH2D3AQ9BRG2 576 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 TMBIM4Q9HC24 238 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 RSPH14Q9UHP6 348 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 NOCTQ9UK39 431 aaKnown RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 SAMM50Q9Y512 469 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 MTA2O94776 668 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 FTLP02792 175 aaPredicted RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 HLTFQ14527 1009 aaKnown RBP eCLIP21.35■■□□□ 1.019e-6■□□□□ 9.4
NFIL3-201ENST00000297689 KCTD16Q68DU8 428 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 SCYL3Q8IZE3 742 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 TMEM161BQ8NDZ6 487 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 KAT5Q92993 513 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
NFIL3-201ENST00000297689 LRRC45Q96CN5 670 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 RNPC3Q96LT9 517 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms