RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ZNF577Q9BSK1 485 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 TRAF3IP3Q9Y228 551 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 H0Y3Z8 333 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 PHF2O75151 1096 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 EYA4O95677 639 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 FOSP01100 380 aaPredicted RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 IFNB1P01574 187 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 ATP5DP30049 168 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 PCK1P35558 622 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 MXI1P50539 228 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 CROCCP2Q86T23 111 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 ZNF564Q8TBZ8 553 aaPredicted RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 FBF1Q8TES7 1133 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 LARSQ9P2J5 1176 aaKnown RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 TISP43B9A030 160 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 GH2P01242 217 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 ATF2P15336 505 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 CCDC6Q16204 474 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 C9orf72Q96LT7 481 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 BMP3P12645 472 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 CTNNA2P26232 953 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 MAPK4P31152 587 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 CETN2P41208 172 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 ERMARDQ5T6L9 678 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 FMNL3Q8IVF7 1028 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 PRCCQ92733 491 aaPredicted RBP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 ANAPC7Q9UJX3 599 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 ASTN1O14525 1302 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 SORBS3O60504 671 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 SPAG7O75391 227 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 AGTP01019 485 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 RWDD2BP57060 319 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 KRT17Q04695 432 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 KAT5Q92993 513 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
TMEM200A-201ENST00000296978 GLI3P10071 1580 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 MIF4GDA9UHW6 222 aaKnown RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 H0YGN5 161 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ATP6V1G2O95670 118 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 MIER3Q7Z3K6 550 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ZFPM1Q8IX07 1006 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 NFS1Q9Y697 457 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 AFF2P51816 1311 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 WDR91A4D1P6 747 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 RASSF9O75901 435 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ECHS1P30084 290 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 PRKCIP41743 596 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ZNF131P52739 623 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 FAM102BQ5T8I3 360 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 NACC1Q96RE7 527 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 AGPAT3Q9NRZ7 376 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 CTNNAL1Q9UBT7 734 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 TTC7AQ9ULT0 858 aaPredicted RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 SLC16A3O15427 465 aaKnown RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 PYGMP11217 842 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 ZBTB16Q05516 673 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 BFSP1Q12934 665 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 PREPLQ4J6C6 727 aaPredicted RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 EHMT1Q9H9B1 1298 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 NOP53Q9NZM5 478 aaKnown RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 TMEM59LQ9UK28 342 aa13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
TMEM200A-201ENST00000296978 CES2O00748 559 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 HIP1RO75146 1068 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 SGPL1O95470 568 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 ANP32DO95626 131 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 POLR2MP0CAP2 368 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 MYCLP12524 364 aaPredicted RBP13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 TM4SF1P30408 202 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 SHMT1P34896 483 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 VAMP7P51809 220 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 KCNJ2P63252 427 aa13.49□□□□□ -0.25
TMEM200A-201ENST00000296978 MTM1Q13496 603 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms