RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CCDC68Q9H2F9 335 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 TOPORSQ9NS56 1045 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZBTB22O15209 634 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 AKR1B1P15121 316 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 DSTYKQ6XUX3 929 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 DCLK2Q8N568 766 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 HEXIM2Q96MH2 286 aaKnown RBP17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 GOLGA8MH3BSY2 632 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 PDXKO00764 312 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 GYG2O15488 501 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 NCF2P19878 526 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 POLE2P56282 527 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 MAPK6Q16659 721 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 TMEM270Q6UE05 265 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 EIF2AK1Q9BQI3 630 aaKnown RBP17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 PSD3Q9NYI0 1048 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 GOLGA8QA0A0J9YX86 632 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 GOLGA8OA6NCC3 632 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 GOLGA8NF8WBI6 632 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 COPEO14579 308 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 TMPRSS15P98073 1019 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 PLCB4Q15147 1175 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 MCUQ8NE86 351 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 FAF2Q96CS3 445 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 FAF1Q9UNN5 650 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 PFASO15067 1338 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 MYMKA6NI61 221 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 KLK7P49862 253 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 CDO1Q16878 200 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 HNRNPLLQ8WVV9 542 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■■ 62.8
ARHGEF28-201ENST00000296794 PPWD1Q96BP3 646 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 PPARGC1AQ9UBK2 798 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 CSPG5O95196 566 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 THNSL1Q8IYQ7 743 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 C1orf54Q8WWF1 131 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 G3BP2Q9UN86 482 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 EMSYQ7Z589 1322 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 PLA2G4AP47712 749 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 CCT8L2Q96SF2 557 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
ARHGEF28-201ENST00000296794 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTI1O43156 1089 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 FGFR4P22455 802 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 CRLF3Q8IUI8 442 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 LRRC37BQ96QE4 947 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 CYTH2Q99418 400 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 SNF8Q96H20 258 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 MMP19Q99542 508 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 CPSF3Q9UKF6 684 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 HMGCS2P54868 508 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 LXNQ9BS40 222 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 FGFR1OP2Q9NVK5 253 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 SRGAP2BP0DMP2 458 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 SFNP31947 248 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 KRT39Q6A163 491 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-201ENST00000296794 GGPS1O95749 300 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANXA13P27216 316 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 PHKA2P46019 1235 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 STX1BP61266 288 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANKRD20A4Q4UJ75 823 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANKRD20A2Q5SQ80 823 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANKRD20A1Q5TYW2 823 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 PNKPQ96T60 521 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 AGPAT1Q99943 283 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 TRIM51Q9BSJ1 452 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 KIAA1586Q9HCI6 787 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTC4O95801 387 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms