RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 CNTNAP2Q9UHC6 1331 aa17.89■□□□□ 0.45
TMEM41A-201ENST00000296254 PLXNA3P51805 1871 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 MYO10Q9HD67 2058 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 AFF1P51825 1210 aaKnown RBP17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 LETM2Q2VYF4 491 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 CPLX2Q6PUV4 134 aaKnown RBP17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 CCDC149Q6ZUS6 474 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 GPR149Q86SP6 731 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 FAM20AQ96MK3 541 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 MINDY3Q9H8M7 445 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 RSAD1Q9HA92 442 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 LIMD1Q9UGP4 676 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 CYP46A1Q9Y6A2 500 aa17.88■□□□□ 0.45
TMEM41A-201ENST00000296254 DDHD2O94830 711 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 GCFC2P16383 781 aaKnown RBP17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 HOXA11P31270 313 aaPredicted RBP17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 RFC5P40937 340 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 CLCN4P51793 760 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 UBXN11Q5T124 520 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 SRGAP1Q7Z6B7 1085 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 MRPL10Q7Z7H8 261 aaKnown RBP17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 NEK8Q86SG6 692 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 EXOC8Q8IYI6 725 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 ZNF579Q8NAF0 562 aaKnown RBP17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 PRPF31Q8WWY3 499 aaKnown RBP17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 TMEM143Q96AN5 459 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 LXNQ9BS40 222 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 TMEM175Q9BSA9 504 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 EMILIN2Q9BXX0 1053 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
TMEM41A-201ENST00000296254 CCDC194A0A1B0GVG4 234 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 PROB1E7EW31 1015 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 LILRB3O75022 631 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 P4HBP07237 508 aaKnown RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 CNPP09543 421 aaKnown RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 STK3Q13188 491 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 ASTLQ6HA08 431 aaPredicted RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 C15orf39Q6ZRI6 1047 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 ACSF2Q96CM8 615 aaPredicted RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 KLHL5Q96PQ7 755 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 LARP6Q9BRS8 491 aaKnown RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 PHF20Q9BVI0 1012 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 BMP2KQ9NSY1 1161 aaPredicted RBP17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 KANSL3Q9P2N6 904 aa17.86■□□□□ 0.45
TMEM41A-201ENST00000296254 SPDYE4A6NLX3 237 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 SSBP05455 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 SRGAP2CP0DJJ0 459 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 KLRC2P26717 231 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 YWHABP31946 246 aaKnown RBP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 EMC2Q15006 297 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 CWF19L1Q69YN2 538 aaKnown RBP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 OTOP3Q7RTS5 596 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 C4orf19Q8IY42 314 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 HAS1Q92839 578 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 MFSD1Q9H3U5 465 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 MRPL17Q9NRX2 175 aaKnown RBP17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 MARCH5Q9NX47 278 aa17.85■□□□□ 0.45
TMEM41A-201ENST00000296254 C2orf16Q68DN1 1984 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 ARID2Q68CP9 1835 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 DCHS1Q96JQ0 3298 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 STK36Q9NRP7 1315 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 NRP1O14786 923 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 TBX3O15119 743 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 INPPL1O15357 1258 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 CDKL5O76039 1030 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 POMCP01189 267 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 SOD2P04179 222 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 URODP06132 367 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 CLCN5P51795 746 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 SPIRE1Q08AE8 756 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 RNF149Q8NC42 400 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 SMG8Q8ND04 991 aaKnown RBP17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 TCP11Q8WWU5 503 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 FAM193BQ96PV7 902 aaPredicted RBP17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 HERC2P3Q9BVR0 1158 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 FAN1Q9Y2M0 1017 aa17.84■□□□□ 0.45
TMEM41A-201ENST00000296254 CCNT1O60563 726 aaKnown RBP17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 ERLIN2O94905 339 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 ALDH2P05091 517 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 NBL1P41271 181 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 SCRN1Q12765 414 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 PCBP1Q15365 356 aaKnown RBP eCLIP17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 EPHA7Q15375 998 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 RNF168Q8IYW5 571 aaPredicted RBP17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 CNNM3Q8NE01 707 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 CMASQ8NFW8 434 aaPredicted RBP17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 CCDC51Q96ER9 411 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 SNX27Q96L92 541 aa17.83■□□□□ 0.44
TMEM41A-201ENST00000296254 RPS6KC1Q96S38 1066 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms